1 H, 15 N and 13 C resonance assignments of the Q61H mutant of human KRAS bound to GDP

IF 0.8 4区 生物学 Q4 BIOPHYSICS Biomolecular NMR Assignments Pub Date : 2021-11-17 DOI:10.1007/s12104-021-10058-z
Qiwei Huang, Elizabeth Yihui Ng, Qingxin Li, CongBao Kang
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引用次数: 1

Abstract

KRAS proteins are small GTPases binding to the cell membrane and playing important roles in signal transduction. KRAS proteins form complexes with GTP and GDP to result in active and inactive conformations favouring interactions with different proteins. Mutations in KRAS have impact on the GTPase activity and some mutants are related to certain types of cancers. In addition to mutation at position 12, the Q61H mutant is also identified as an oncogenic mutant. Here, we describe resonance assignment for Q61H mutant of human KRAS-4B. A construct containing 1-169 residues of KRAS with a point mutation at position 61 (Q to H) was made for solution NMR studies. The backbone and some side chain resonance assignments were obtained using conventional multi-dimensional experiments. The secondary structures were analysed based on the assigned residues. As NMR is a powerful tool in probing target and ligand interactions, the assignment will be useful for later compound binding studies.

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人KRAS与GDP结合的Q61H突变体的1H、15 N和13 C共振分配
KRAS蛋白是与细胞膜结合的小gtpase,在信号转导中起重要作用。KRAS蛋白与GTP和GDP形成复合物,形成有利于与不同蛋白质相互作用的活性和非活性构象。KRAS突变对GTPase活性有影响,一些突变与某些类型的癌症有关。除了第12位突变外,Q61H突变也被鉴定为致癌突变。在这里,我们描述了人类KRAS-4B的Q61H突变体的共振分配。构建了一个含有1-169个KRAS残基的结构体,在61位(Q到H)有一个点突变,用于溶液核磁共振研究。通过常规的多维实验得到了主链和部分侧链的共振配位。根据指定残基对二级结构进行了分析。由于核磁共振是探测靶与配体相互作用的有力工具,该指派将对以后的化合物结合研究有用。
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来源期刊
Biomolecular NMR Assignments
Biomolecular NMR Assignments 生物-光谱学
CiteScore
1.70
自引率
11.10%
发文量
59
审稿时长
6-12 weeks
期刊介绍: Biomolecular NMR Assignments provides a forum for publishing sequence-specific resonance assignments for proteins and nucleic acids as Assignment Notes. Chemical shifts for NMR-active nuclei in macromolecules contain detailed information on molecular conformation and properties. Publication of resonance assignments in Biomolecular NMR Assignments ensures that these data are deposited into a public database at BioMagResBank (BMRB; http://www.bmrb.wisc.edu/), where they are available to other researchers. Coverage includes proteins and nucleic acids; Assignment Notes are processed for rapid online publication and are published in biannual online editions in June and December.
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