Pure shift amide detection in conventional and TROSY-type experiments of 13C,15N-labeled proteins

IF 1.3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Biomolecular NMR Pub Date : 2022-11-18 DOI:10.1007/s10858-022-00406-z
Jens D. Haller, Andrea Bodor, Burkhard Luy
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引用次数: 1

Abstract

Large coupling networks in uniformly 13C,15N-labeled biomolecules induce broad multiplets that even in flexible proteins are frequently not recognized as such. The reason is that given multiplets typically consist of a large number of individual resonances that result in a single broad line, in which individual components are no longer resolved. We here introduce a real-time pure shift acquisition scheme for the detection of amide protons which is based on 13C-BIRDr,X. As a result the full homo- and heteronuclear coupling network can be suppressed at low power leading to real singlets at substantially improved resolution and uncompromised sensitivity. The method is tested on a small globular and an intrinsically disordered protein (IDP) where the average spectral resolution is increased by a factor of ~ 2 and higher. Equally important, the approach works without saturation of water magnetization for solvent suppression and exchanging amide protons are not affected by saturation transfer.

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13C, 15n标记蛋白的常规和trosy型实验的纯移位酰胺检测
在均匀的13C, 15n标记的生物分子中,大的偶联网络诱导了广泛的多联体,即使在柔性蛋白中也经常不被识别出来。原因是给定的多胞胎通常由大量的单个共振组成,导致单一的宽线,其中单个组件不再被分解。本文介绍了一种基于13C-BIRDr,X的实时纯位移采集方案,用于酰胺质子的检测。因此,在低功率下可以抑制全同核和异核耦合网络,从而获得分辨率大大提高且灵敏度不受影响的真正单重态。该方法在小球形和内在无序蛋白(IDP)上进行了测试,平均光谱分辨率提高了2倍甚至更高。同样重要的是,该方法不需要水的饱和磁化,溶剂抑制和交换酰胺质子不受饱和转移的影响。
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来源期刊
Journal of Biomolecular NMR
Journal of Biomolecular NMR 生物-光谱学
CiteScore
6.00
自引率
3.70%
发文量
19
审稿时长
6-12 weeks
期刊介绍: The Journal of Biomolecular NMR provides a forum for publishing research on technical developments and innovative applications of nuclear magnetic resonance spectroscopy for the study of structure and dynamic properties of biopolymers in solution, liquid crystals, solids and mixed environments, e.g., attached to membranes. This may include: Three-dimensional structure determination of biological macromolecules (polypeptides/proteins, DNA, RNA, oligosaccharides) by NMR. New NMR techniques for studies of biological macromolecules. Novel approaches to computer-aided automated analysis of multidimensional NMR spectra. Computational methods for the structural interpretation of NMR data, including structure refinement. Comparisons of structures determined by NMR with those obtained by other methods, e.g. by diffraction techniques with protein single crystals. New techniques of sample preparation for NMR experiments (biosynthetic and chemical methods for isotope labeling, preparation of nutrients for biosynthetic isotope labeling, etc.). An NMR characterization of the products must be included.
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