Design and applications of lanthanide chelating tags for pseudocontact shift NMR spectroscopy with biomacromolecules

IF 7.3 2区 化学 Q2 CHEMISTRY, PHYSICAL Progress in Nuclear Magnetic Resonance Spectroscopy Pub Date : 2019-10-01 DOI:10.1016/j.pnmrs.2019.08.002
Daniel Joss, Daniel Häussinger
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引用次数: 5

Abstract

In this review, lanthanide chelating tags and their applications to pseudocontact shift NMR spectroscopy as well as analysis of residual dipolar couplings are covered. A complete overview is presented of DOTA-derived and non-DOTA-derived lanthanide chelating tags, critical points in the design of lanthanide chelating tags as appropriate linker moieties, their stability under reductive conditions, e.g., for in-cell applications, the magnitude of the anisotropy transferred from the lanthanide chelating tag to the biomacromolecule under investigation and structural properties, as well as conformational bias of the lanthanide chelating tags are discussed. Furthermore, all DOTA-derived lanthanide chelating tags used for PCS NMR spectroscopy published to date are displayed in tabular form, including their anisotropy parameters, with all employed lanthanide ions, CB-Ln distances and tagging reaction conditions, i.e., the stoichiometry of lanthanide chelating tags, pH, buffer composition, temperature and reaction time. Additionally, applications of lanthanide chelating tags for pseudocontact shifts and residual dipolar couplings that have been reported for proteins, protein-protein and protein-ligand complexes, carbohydrates, carbohydrate-protein complexes, nucleic acids and nucleic acid-protein complexes are presented and critically reviewed. The vast and impressive range of applications of lanthanide chelating tags to structural investigations of biomacromolecules in solution clearly illustrates the significance of this particular field of research. The extension of the repertoire of lanthanide chelating tags from proteins to nucleic acids holds great promise for the determination of valuable structural parameters and further developments in characterizing intermolecular interactions.

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用于生物大分子伪接触位移核磁共振波谱的镧系元素螯合标签的设计和应用。
本文综述了镧系螯合标签及其在赝接触位移核磁共振光谱和残余偶极耦合分析中的应用。完整概述了dota衍生的和非dota衍生的镧系螯合标签,设计镧系螯合标签作为合适的连接基团的关键要点,它们在还原条件下的稳定性,例如在细胞内应用,从镧系螯合标签转移到生物大分子的各向异性的大小和结构性质,以及镧系螯合标签的构象偏差进行了讨论。此外,迄今为止发表的用于PCS NMR光谱的所有dota衍生镧系螯合标签都以表格形式显示,包括其各向异性参数,所有使用的镧系离子,CB-Ln距离和标记反应条件,即镧系螯合标签的化学计量学,pH,缓冲液成分,温度和反应时间。此外,镧系螯合标签在蛋白质、蛋白质-蛋白质和蛋白质-配体复合物、碳水化合物、碳水化合物-蛋白质复合物、核酸和核酸-蛋白质复合物中的假接触位移和残余偶极偶联的应用也被报道并进行了批判性的回顾。镧系螯合标签在溶液中生物大分子结构研究中的广泛而令人印象深刻的应用清楚地说明了这一特定研究领域的重要性。镧系螯合标签从蛋白质到核酸的扩展,为确定有价值的结构参数和进一步发展表征分子间相互作用提供了很大的希望。
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来源期刊
CiteScore
14.30
自引率
8.20%
发文量
12
审稿时长
62 days
期刊介绍: Progress in Nuclear Magnetic Resonance Spectroscopy publishes review papers describing research related to the theory and application of NMR spectroscopy. This technique is widely applied in chemistry, physics, biochemistry and materials science, and also in many areas of biology and medicine. The journal publishes review articles covering applications in all of these and in related subjects, as well as in-depth treatments of the fundamental theory of and instrumental developments in NMR spectroscopy.
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