A Size-Dependent Multiple-Loop Negative Feedback System Describes Biological Segment Formation Based on the Clock and Wavefront Mechanism

Yusuke Shibasaki, C. Yoshida-Noro, Minoru Saito
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Abstract

We proposed a new mathematical model for biological segment formation based on the clock and wavefront mechanism suggested in 1970s. Here, we chose an invertebrate, Enchytraeus japonensis, as a model animal and adopted multiple-loop negative feedback system based on its physiological features. We numerically showed the segment number of the model animal is autopoietically controlled by a size-dependent function. Additionally, we discussed two cases of the irregular oscillations by applying the biological conditions for abnormal development. The present model showed robustness under local noise perturbations like many other biological oscillators and qualitatively described unique development of the model animal. As a result, we suggested that a global interaction of chemical signals in the body can also drive “segmentation clock”.
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基于时钟和波前机制的描述生物节段形成的尺寸相关多环负反馈系统
基于20世纪70年代提出的时钟和波前机制,我们提出了一种新的生物节段形成数学模型。在这里,我们选择了一种无脊椎动物日本卷尾虫(Enchytraeus japonensis)作为模型动物,并根据其生理特征采用了多回路负反馈系统。我们用数字表明,模型动物的节段数是由一个大小依赖函数自动控制的。此外,我们通过应用异常发育的生物学条件讨论了两种不规则振荡的情况。与许多其他生物振荡器一样,本模型在局部噪声扰动下表现出稳健性,并定性描述了模型动物的独特发育。因此,我们提出,体内化学信号的全局相互作用也可以驱动“分割时钟”。
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