VIRTUAL SCREENING OF NATURAL ALPHA-GLUCOSIDASE INHIBITOR FROM ALPINIA GALANGA BIOACTIVE COMPOUNDS AS ANTI-DIABETIC CANDIDATE

IF 0.6 Q4 FOOD SCIENCE & TECHNOLOGY Journal of microbiology, biotechnology and food sciences Pub Date : 2023-05-16 DOI:10.55251/jmbfs.4353
W. E. Putra, Sustiprijatno, Arief Hidayatullah, D. Widiastuti, Muhammad F Heikal, W. Salma
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Abstract

Glucose toxicity become serious risk factor of type 2 diabetes mellitus. Multiple complication can be caused of the abnormal condition of glucose level in blood. Thus, managing the plasma glucose is one of the strategy to minimize the negative effects of type 2 diabetes mellitus. In this present study, we aimed to virtually evaluate the bioactive compounds from Alpinia galanga as inhibitor agent against alpha-glucosidase, which was known as carbohydrate catabolic enzyme. The 2D structure of ligands were retrieved from PubChem database (pubchem.ncbi.nlm.nih.gov/) and were evaluated based on Lipinski rule of five for ensured the druglike-ness standard, while the sequence and 3D structure of target protein, alpha-glucosidase, was retrieved from UniProt database (https://www.uniprot.org/) and was modelled through SWISS-MODEL (swissmodel.expasy.org/). All ligands used in this study then underwent optimization prior to molecular docking and analyzing procedures. According to our prediction results, we found that galangin and 1's-1'-acetoxychavicol acetate which known as bioactive compounds found in A. galanga have significant potency as inhibitor agents against the alpha-glucosidase due to its binding affinity scores and other physicochemical properties compared to the anti-diabetic drug, mignitol. Thus, from this finding, we have recent starting point to expand the potency of these bioactive compounds, especially for inhibiting the alpha-glucosidase as the novel strategy to reduce the poor prognosis of type 2 diabetes mellitus.
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高良姜生物活性化合物天然α -葡萄糖苷酶抑制剂抗糖尿病候选物的虚拟筛选
葡萄糖毒性已成为2型糖尿病的重要危险因素。血糖异常可引起多种并发症。因此,控制血糖是减少2型糖尿病负面影响的策略之一。在本研究中,我们旨在对高良姜中作为α -葡萄糖苷酶抑制剂的生物活性化合物进行虚拟评价。配体的二维结构从PubChem数据库(PubChem .ncbi.nlm.nih.gov/)中检索,并根据Lipinski五法则进行评价,以确保药物样度标准;靶蛋白α -葡萄糖苷酶的序列和三维结构从UniProt数据库(https://www.uniprot.org/)中检索,并通过SWISS-MODEL (swissmodel.expasy.org/).)建模在分子对接和分析程序之前,本研究中使用的所有配体都进行了优化。根据我们的预测结果,我们发现高良姜中发现的生物活性化合物高良姜素和1' '- 1'-乙酰恰维醇醋酸酯与降糖药米尼糖醇相比,由于其结合亲和力评分和其他物理化学性质,它们作为α -葡萄糖苷酶抑制剂具有显著的效力。因此,从这一发现,我们有了新的起点,以扩大这些生物活性化合物的效力,特别是抑制α -葡萄糖苷酶作为减少2型糖尿病不良预后的新策略。
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来源期刊
CiteScore
1.90
自引率
0.00%
发文量
156
审稿时长
8 weeks
期刊介绍: The Journal of Microbiology, Biotechnology and Food Sciences is an Open Access, peer-reviewed online scientific journal published by the Faculty of Biotechnology and Food Sciences (Slovak University of Agriculture in Nitra). The major focus of the journal is regular publishing of original scientific articles, short communications and reviews about animal, plant and environmental microbiology (including bacteria, fungi, yeasts, algae, protozoa and viruses), microbial, animal and plant biotechnology and physiology, microbial, plant and animal genetics, molecular biology, agriculture and food chemistry and biochemistry, food control, evaluation and processing in food science and environmental sciences.
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