Integrative analysis of chemical properties and functions of drugs for adverse drug reaction prediction based on multi-label deep neural network

IF 1.5 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Journal of Integrative Bioinformatics Pub Date : 2022-05-19 DOI:10.1515/jib-2022-0007
Pranab Das, Yogita, V. Pal
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引用次数: 3

Abstract

Abstract The prediction of adverse drug reactions (ADR) is an important step of drug discovery and design process. Different drug properties have been employed for ADR prediction but the prediction capability of drug properties and drug functions in integrated manner is yet to be explored. In the present work, a multi-label deep neural network and MLSMOTE based methodology has been proposed for ADR prediction. The proposed methodology has been applied on SMILES Strings data of drugs, 17 molecular descriptors data of drugs and drug functions data individually and in integrated manner for ADR prediction. The experimental results shows that the SMILES Strings + drug functions has outperformed other types of data with regards to ADR prediction capability.
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基于多标签深度神经网络的药物化学性质和功能综合分析用于药物不良反应预测
摘要药物不良反应(ADR)的预测是药物发现和设计过程中的重要步骤。不同的药物性质已被用于ADR预测,但药物性质和药物功能的综合预测能力尚待探索。在本工作中,提出了一种基于多标签深度神经网络和MLSMOTE的ADR预测方法。该方法已分别应用于药物的SMILES字符串数据、药物的17个分子描述符数据和药物功能数据,并以集成的方式进行ADR预测。实验结果表明,SMILES Strings+药物功能在ADR预测能力方面优于其他类型的数据。
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来源期刊
Journal of Integrative Bioinformatics
Journal of Integrative Bioinformatics Medicine-Medicine (all)
CiteScore
3.10
自引率
5.30%
发文量
27
审稿时长
12 weeks
期刊最新文献
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