Early Pathogen Prediction in Crops Using Nano Biosensors and Neural Network-Based Feature Extraction and Classification

IF 3.5 3区 计算机科学 Q2 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Big Data Research Pub Date : 2023-09-17 DOI:10.1016/j.bdr.2023.100412
Mohammad Khalid Imam Rahmani , Hayder M.A. Ghanimi , Syeda Fizzah Jilani , Muhammad Aslam , Meshal Alharbi , Roobaea Alroobaea , Sudhakar Sengan
{"title":"Early Pathogen Prediction in Crops Using Nano Biosensors and Neural Network-Based Feature Extraction and Classification","authors":"Mohammad Khalid Imam Rahmani ,&nbsp;Hayder M.A. Ghanimi ,&nbsp;Syeda Fizzah Jilani ,&nbsp;Muhammad Aslam ,&nbsp;Meshal Alharbi ,&nbsp;Roobaea Alroobaea ,&nbsp;Sudhakar Sengan","doi":"10.1016/j.bdr.2023.100412","DOIUrl":null,"url":null,"abstract":"<div><p>The most prevalent microbe-caused issues that reduce agricultural output globally are viral and bacterial infections. It is currently quite challenging to identify pathogens due to the current living situation. Biosensors have become the standard for monitoring microbial and viral macromolecules. Disease diagnosis is improved by following the nanoparticles released by infections. Since the sensors' data includes different learning patterns, Machine Learning<span> (ML) methods are used to analyze and interpret it. This research paper aimed to study whether Near-infrared (nIR) and Red, Green, and Blue (RGB) imaging might be used to define and detect Plant Disease (PD) using Convolutional Neural Network (CNN)-based Feature Extraction (FE) and Feature Classification (FC). A home-built Single-Walled Carbon NanoTube (SWCNTs) implemented with a Deoxyribonucleic Acid (DNA) aptamer that binds to a Hemi (HeApt + DNA + SWCNT) sensing device was used to analyze near-infrared (nIR) and RGB images of tea plant leaf samples. Three labels are extracted from the nIR + RGB using a Wasserstein Distance (WD)-based Feature Extraction Model (FEM), and then all those labels are loaded into the proposed CNN model to ensure precise classification. The proposed Wasserstein Distance-to-Convolutional Neural Network (WD2CNN) model was compared to different CNN architectures on the same dataset, achieving the highest accuracy of 98.72%. It is also the most computationally efficient, with the shortest average time per epoch. The model demonstrates high performance and efficiency in classifying biosensor images, which could aid in the early detection and prevention of Crop Diseases (CD).</span></p></div>","PeriodicalId":56017,"journal":{"name":"Big Data Research","volume":"34 ","pages":"Article 100412"},"PeriodicalIF":3.5000,"publicationDate":"2023-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Big Data Research","FirstCategoryId":"94","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S221457962300045X","RegionNum":3,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE","Score":null,"Total":0}
引用次数: 0

Abstract

The most prevalent microbe-caused issues that reduce agricultural output globally are viral and bacterial infections. It is currently quite challenging to identify pathogens due to the current living situation. Biosensors have become the standard for monitoring microbial and viral macromolecules. Disease diagnosis is improved by following the nanoparticles released by infections. Since the sensors' data includes different learning patterns, Machine Learning (ML) methods are used to analyze and interpret it. This research paper aimed to study whether Near-infrared (nIR) and Red, Green, and Blue (RGB) imaging might be used to define and detect Plant Disease (PD) using Convolutional Neural Network (CNN)-based Feature Extraction (FE) and Feature Classification (FC). A home-built Single-Walled Carbon NanoTube (SWCNTs) implemented with a Deoxyribonucleic Acid (DNA) aptamer that binds to a Hemi (HeApt + DNA + SWCNT) sensing device was used to analyze near-infrared (nIR) and RGB images of tea plant leaf samples. Three labels are extracted from the nIR + RGB using a Wasserstein Distance (WD)-based Feature Extraction Model (FEM), and then all those labels are loaded into the proposed CNN model to ensure precise classification. The proposed Wasserstein Distance-to-Convolutional Neural Network (WD2CNN) model was compared to different CNN architectures on the same dataset, achieving the highest accuracy of 98.72%. It is also the most computationally efficient, with the shortest average time per epoch. The model demonstrates high performance and efficiency in classifying biosensor images, which could aid in the early detection and prevention of Crop Diseases (CD).

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
基于纳米生物传感器和神经网络的作物早期病原预测特征提取与分类
全球最普遍的由微生物引起的降低农业产量的问题是病毒和细菌感染。由于目前的生活状况,识别病原体目前相当具有挑战性。生物传感器已成为监测微生物和病毒大分子的标准。通过追踪感染释放的纳米颗粒,可以改善疾病诊断。由于传感器的数据包括不同的学习模式,因此使用机器学习(ML)方法对其进行分析和解释。本文旨在研究是否可以使用基于卷积神经网络(CNN)的特征提取(FE)和特征分类(FC)的近红外(nIR)和红、绿、蓝(RGB)成像来定义和检测植物疾病(PD)。使用自制的单壁碳纳米管(SWCNTs),用与Hemi(HeApt+DNA+SWCNT)传感装置结合的脱氧核糖核酸(DNA)适体来分析茶树叶样品的近红外(nIR)和RGB图像。使用基于Wasserstein距离(WD)的特征提取模型(FEM)从nIR+RGB中提取三个标签,然后将所有这些标签加载到所提出的CNN模型中,以确保精确分类。将所提出的Wasserstein距离卷积神经网络(WD2CNN)模型与同一数据集上的不同CNN架构进行比较,获得了98.72%的最高精度。它也是计算效率最高的,每个历元的平均时间最短。该模型在生物传感器图像分类方面表现出较高的性能和效率,有助于作物疾病的早期检测和预防。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Big Data Research
Big Data Research Computer Science-Computer Science Applications
CiteScore
8.40
自引率
3.00%
发文量
0
期刊介绍: The journal aims to promote and communicate advances in big data research by providing a fast and high quality forum for researchers, practitioners and policy makers from the very many different communities working on, and with, this topic. The journal will accept papers on foundational aspects in dealing with big data, as well as papers on specific Platforms and Technologies used to deal with big data. To promote Data Science and interdisciplinary collaboration between fields, and to showcase the benefits of data driven research, papers demonstrating applications of big data in domains as diverse as Geoscience, Social Web, Finance, e-Commerce, Health Care, Environment and Climate, Physics and Astronomy, Chemistry, life sciences and drug discovery, digital libraries and scientific publications, security and government will also be considered. Occasionally the journal may publish whitepapers on policies, standards and best practices.
期刊最新文献
Modeling meaningful volatility events to classify monetary policy announcements Predicting option prices: From the Black-Scholes model to machine learning methods Editorial Board Efficient training: Federated learning cost analysis Improved Tesseract optical character recognition performance on Thai document datasets
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1