Sequence dependent N-terminal rearrangement and degradation of peptide nucleic acid (PNA) in aqueous solution.

M. Eriksson, L. Christensen, J. Schmidt, G. Haaima, L. Orgel, P. Nielsen
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引用次数: 29

Abstract

The stability of the PNA (peptide nucleic acid) thymine monomer ¿N-[2-(thymin-1-ylacetyl)]-N-(2-aminoaminoethyl)glycine¿ and those of various PNA oligomers (5-8-mers) have been measured at room temperature (20 degrees C) as a function of pH. The thymine monomer undergoes N-acyl transfer rearrangement with a half-life of 34 days at pH 11 as analyzed by 1H NMR; and two reactions, the N-acyl transfer and a sequential degradation, are found by HPLC analysis to occur at measurable rates for the oligomers at pH 9 or above. Dependent on the amino-terminal sequence, half-lives of 350 h to 163 days were found at pH 9. At pH 12 the half-lives ranged from 1.5 h to 21 days. The results are discussed in terms of PNA as a gene therapeutic drug as well as a possible prebiotic genetic material.
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肽核酸(PNA)在水溶液中序列依赖的n端重排和降解。
在室温(20℃)下,测定了PNA(肽核酸)胸腺嘧啶单体N-[2-(胸腺嘧啶-1-乙酰基)]-N-(2-氨基氨基乙基)甘氨酸和各种PNA低聚物(5-8-mers)的稳定性与pH的关系。经1H NMR分析,胸腺嘧啶单体在pH为11时发生N-酰基转移重排,半衰期为34天;通过高效液相色谱分析发现,在pH值为9或更高时,n -酰基转移和顺序降解两个反应以可测量的速率发生。根据氨基端序列,在pH为9时发现半衰期为350 h至163天。在pH为12时,半衰期从1.5小时到21天不等。从PNA作为一种基因治疗药物以及可能的益生元遗传物质的角度讨论了这些结果。
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Sequence dependent N-terminal rearrangement and degradation of peptide nucleic acid (PNA) in aqueous solution.
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