{"title":"Recent Progress in the pKa Estimation of Druglike Molecules by the Nonlinear Regression of Multiwavelength Spectrophotometric pH-Titration Data","authors":"M. Meloun, T. Syrový, Jahan B. Ghasemi","doi":"10.3814/2010/481497","DOIUrl":null,"url":null,"abstract":"Recent developments in the computational diagnostic tools for the p K a estimation of druglike molecules carried out by the nonlinear regression of multiwavelength spectrophotometric pH-titration data are demonstrated on the protonation equilibria of silybin. The factor analysis of spectra predict the correct number of components when the signal-to-error ratio SER is higher than 10. The mixed dissociation constants of the drug silybin at ionic strength I = 0.03 and a temperature of 25 ∘ C were determined using two different programs, SPECFIT32 and SQUAD(84). A proposed experimental and computational strategy for the determination of the dissociation constants is presented. The dissociation constant p K a was estimated by nonlinear regression of the { p K a , I } data at 25 ∘ C with SQUAD (and SPECFIT); that is, p K a 1 = 6.898(0.022) and 6.897(0.002); p K a 2 = 8.666(0.021) and 8.667(0.012); p K a 3 = 9.611(0.010) and 9.611(0.004); p K a 4 = 11.501(0.008) and 11.501(0.007). While great progress has been achieved in terms of the reliability of the protonation model estimation, among the most efficient diagnostics of the nonlinear regression of multiwavelength pH-spectra are the goodness-of-fit test, Cattel's scree plot of the factor analysis, spectra deconvolution, the signal-to-error SER ratio analysis, and other tools of efficient spectra analysis.","PeriodicalId":90346,"journal":{"name":"SRX pharmacology","volume":"2010 1","pages":"1-10"},"PeriodicalIF":0.0000,"publicationDate":"2010-03-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"3","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"SRX pharmacology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3814/2010/481497","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 3
Abstract
Recent developments in the computational diagnostic tools for the p K a estimation of druglike molecules carried out by the nonlinear regression of multiwavelength spectrophotometric pH-titration data are demonstrated on the protonation equilibria of silybin. The factor analysis of spectra predict the correct number of components when the signal-to-error ratio SER is higher than 10. The mixed dissociation constants of the drug silybin at ionic strength I = 0.03 and a temperature of 25 ∘ C were determined using two different programs, SPECFIT32 and SQUAD(84). A proposed experimental and computational strategy for the determination of the dissociation constants is presented. The dissociation constant p K a was estimated by nonlinear regression of the { p K a , I } data at 25 ∘ C with SQUAD (and SPECFIT); that is, p K a 1 = 6.898(0.022) and 6.897(0.002); p K a 2 = 8.666(0.021) and 8.667(0.012); p K a 3 = 9.611(0.010) and 9.611(0.004); p K a 4 = 11.501(0.008) and 11.501(0.007). While great progress has been achieved in terms of the reliability of the protonation model estimation, among the most efficient diagnostics of the nonlinear regression of multiwavelength pH-spectra are the goodness-of-fit test, Cattel's scree plot of the factor analysis, spectra deconvolution, the signal-to-error SER ratio analysis, and other tools of efficient spectra analysis.
用多波长分光光度ph滴定数据的非线性回归来估计类药物分子的pka的计算诊断工具的最新进展,在水飞蓟宾的质子化平衡上得到了证明。当信错比SER大于10时,光谱因子分析可以预测正确的组分数。使用SPECFIT32和SQUAD(84)两种不同的程序测定了药物水飞蓟宾在离子强度I = 0.03和温度25°C下的混合解离常数。提出了一种确定解离常数的实验和计算策略。解离常数kp a用SQUAD(和SPECFIT)对25°C时的{kp a, I}数据进行非线性回归估计;即p K a 1 = 6.898(0.022)、6.897(0.002);p K a 2 = 8.666(0.021)和8.667(0.012);p K a 3 = 9.611(0.010)和9.611(0.004);p = 11.501(0.008)和11.501(0.007)。虽然质子化模型估计的可靠性已经取得了很大的进展,但对多波长ph光谱非线性回归最有效的诊断方法是拟合优度检验、因子分析的Cattel屏幕图、光谱反卷积、信错比分析以及其他有效的光谱分析工具。