Returning incidentally discovered Hepatitis C RNA-seq results to COPDGene study participants.

IF 4.7 2区 医学 Q1 GENETICS & HEREDITY NPJ Genomic Medicine Pub Date : 2023-10-31 DOI:10.1038/s41525-023-00379-4
Edwin K Silverman, Arthur Y Kim, Barry J Make, Elizabeth A Regan, Jarrett D Morrow, Craig P Hersh, James O'Brien, James D Crapo, Nadia N Hansel, Gerard Criner, Eric L Flenaugh, Douglas Conrad, Richard Casaburi, Russell P Bowler, Nicola A Hanania, R Graham Barr, Surya P Bhatt, Frank C Sciurba, Antonio Anzueto, MeiLan K Han, Charlene E McEvoy, Alejandro P Comellas, Dawn L DeMeo, Richard Rosiello, Jeffrey L Curtis, Tricia Uchida, Carla Wilson, P Pearl O'Rourke
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Abstract

The consequences of returning infectious pathogen test results identified incidentally in research studies have not been well-studied. Concerns include identification of an important health issue for individuals, accuracy of research test results, public health impact, potential emotional distress for participants, and need for IRB permissions. Blood RNA-sequencing analysis for non-human RNA in 3984 participants from the COPDGene study identified 228 participants with evidence suggestive for hepatitis C virus (HCV) infection. We hypothesized that incidentally discovered HCV results could be effectively returned to COPDGene participants with attention to the identified concerns. In conjunction with a COPDGene Participant Advisory Panel, we developed and obtained IRB approval for a process of returning HCV research results and an HCV Follow-Up Study questionnaire to capture information about previous HCV diagnosis and treatment information and participant reactions to return of HCV results. During phone calls following the initial HCV notification letter, 84 of 124 participants who could be contacted (67.7%) volunteered that they had been previously diagnosed with HCV infection. Thirty-one of these 124 COPDGene participants were enrolled in the HCV Follow-Up Study. Five of the 31 HCV Follow-Up Study participants did not report a previous diagnosis of HCV. For four of these participants, subsequent clinical HCV testing confirmed HCV infection. Thus, 30/31 Follow-Up Study participants had confirmed HCV diagnoses, supporting the accuracy of the HCV research test results. However, the limited number of participants in the Follow-Up Study precludes an accurate assessment of the false-positive and false-negative rates of the research RNA sequencing evidence for HCV. Most HCV Follow-Up Study participants (29/31) were supportive of returning HCV research results, and most participants found the process for returning HCV results to be informative and not upsetting. Newly diagnosed participants were more likely to be pleased to learn about a potentially curable infection (p = 0.027) and showed a trend toward being more frightened by the potential health risks of HCV (p = 0.11). We conclude that HCV results identified incidentally during transcriptomic research studies can be successfully returned to research study participants with a carefully designed process.

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将偶然发现的丙型肝炎RNA-seq结果返回给COPDGene研究参与者。
研究中偶然发现的传染性病原体检测结果返回的后果尚未得到很好的研究。关注的问题包括识别个人的重要健康问题、研究测试结果的准确性、对公共健康的影响、参与者的潜在情绪困扰以及是否需要IRB许可。对来自COPDGene研究的3984名参与者的非人类RNA进行血液RNA测序分析,确定228名参与者有丙型肝炎病毒(HCV)感染的证据。我们假设偶然发现的HCV结果可以有效地返回给COPDGene参与者,并注意到已确定的问题。我们与COPDGene参与者咨询小组合作,开发并获得了IRB批准,用于返回HCV研究结果和HCV随访研究问卷,以获取有关先前HCV诊断和治疗信息以及参与者对返回HCV结果的反应的信息。在最初的HCV通知信之后的电话中,124名参与者中有84人(67.7%)自愿表示他们以前被诊断为HCV感染。124名COPDGene参与者中有31人参加了HCV随访研究。31名HCV随访研究参与者中有5人未报告既往诊断为HCV。对于其中四名参与者,随后的临床HCV检测证实了HCV感染。因此,30/31随访研究参与者已确认HCV诊断,支持HCV研究检测结果的准确性。然而,随访研究的参与者人数有限,无法准确评估研究中HCV RNA测序证据的假阳性率和假阴性率。大多数HCV随访研究参与者(29/31)支持返回HCV研究结果,大多数参与者发现返回HCV结果的过程是有信息的,而不是令人沮丧的。新确诊的参与者更可能乐于了解潜在的可治愈感染(p = 0.027),并且显示出对HCV的潜在健康风险更加恐惧的趋势(p = 0.11)。我们得出结论,在转录组研究中偶然发现的HCV结果可以通过精心设计的过程成功返回给研究参与者。
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来源期刊
NPJ Genomic Medicine
NPJ Genomic Medicine Biochemistry, Genetics and Molecular Biology-Molecular Biology
CiteScore
9.40
自引率
1.90%
发文量
67
审稿时长
17 weeks
期刊介绍: npj Genomic Medicine is an international, peer-reviewed journal dedicated to publishing the most important scientific advances in all aspects of genomics and its application in the practice of medicine. The journal defines genomic medicine as "diagnosis, prognosis, prevention and/or treatment of disease and disorders of the mind and body, using approaches informed or enabled by knowledge of the genome and the molecules it encodes." Relevant and high-impact papers that encompass studies of individuals, families, or populations are considered for publication. An emphasis will include coupling detailed phenotype and genome sequencing information, both enabled by new technologies and informatics, to delineate the underlying aetiology of disease. Clinical recommendations and/or guidelines of how that data should be used in the clinical management of those patients in the study, and others, are also encouraged.
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