Automated design of a 3D passive microfluidic particle sorter.

IF 2.6 4区 工程技术 Q2 BIOCHEMICAL RESEARCH METHODS Biomicrofluidics Pub Date : 2023-11-01 eCollection Date: 2023-12-01 DOI:10.1063/5.0169562
Kuan-Ming Lai, Zhenya Liu, Yidan Zhang, Junchao Wang, Tsung-Yi Ho
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Abstract

Microfluidic chips that can sort mixtures of cells and other particles have important applications in research and healthcare. However, designing a sorter chip for a given application is a slow and difficult process, especially when we extend the design space from 2D into a 3D scenario. Compared to the 2D scenario, we need to explore more geometries to derive the appropriate design due to the extra dimension. To evaluate sorting performance, the simulation of the particle trajectory is needed. The 3D scenario brings particle trajectory simulation more challenges of runtime and collision handling with irregular obstacle shapes. In this paper, we propose a framework to design a 3D microfluidic particle sorter for a given application with an efficient 3D particle trajectory simulator. The efficient simulator enables us to simulate more samples to ensure the robustness of the sorting performance. Our experimental result shows that the sorter designed by our framework successfully separates the particles with the targeted size.

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3D无源微流体颗粒分选机的自动化设计。
微流控芯片可以对细胞和其他颗粒的混合物进行分类,在研究和医疗保健方面有着重要的应用。然而,为给定的应用程序设计分类器芯片是一个缓慢而困难的过程,尤其是当我们将设计空间从2D扩展到3D场景时。与2D场景相比,由于额外的尺寸,我们需要探索更多的几何形状来获得合适的设计。为了评估排序性能,需要模拟粒子轨迹。3D场景给粒子轨迹模拟带来了更多的运行时间和不规则障碍物形状的碰撞处理挑战。在本文中,我们提出了一个框架,用于设计一个具有高效三维粒子轨迹模拟器的特定应用的三维微流体粒子分选机。高效的模拟器使我们能够模拟更多的样本,以确保排序性能的稳健性。我们的实验结果表明,我们的框架设计的分类器成功地分离出了目标尺寸的颗粒。
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来源期刊
Biomicrofluidics
Biomicrofluidics 生物-纳米科技
CiteScore
5.80
自引率
3.10%
发文量
68
审稿时长
1.3 months
期刊介绍: Biomicrofluidics (BMF) is an online-only journal published by AIP Publishing to rapidly disseminate research in fundamental physicochemical mechanisms associated with microfluidic and nanofluidic phenomena. BMF also publishes research in unique microfluidic and nanofluidic techniques for diagnostic, medical, biological, pharmaceutical, environmental, and chemical applications. BMF offers quick publication, multimedia capability, and worldwide circulation among academic, national, and industrial laboratories. With a primary focus on high-quality original research articles, BMF also organizes special sections that help explain and define specific challenges unique to the interdisciplinary field of biomicrofluidics. Microfluidic and nanofluidic actuation (electrokinetics, acoustofluidics, optofluidics, capillary) Liquid Biopsy (microRNA profiling, circulating tumor cell isolation, exosome isolation, circulating tumor DNA quantification) Cell sorting, manipulation, and transfection (di/electrophoresis, magnetic beads, optical traps, electroporation) Molecular Separation and Concentration (isotachophoresis, concentration polarization, di/electrophoresis, magnetic beads, nanoparticles) Cell culture and analysis(single cell assays, stimuli response, stem cell transfection) Genomic and proteomic analysis (rapid gene sequencing, DNA/protein/carbohydrate arrays) Biosensors (immuno-assay, nucleic acid fluorescent assay, colorimetric assay, enzyme amplification, plasmonic and Raman nano-reporter, molecular beacon, FRET, aptamer, nanopore, optical fibers) Biophysical transport and characterization (DNA, single protein, ion channel and membrane dynamics, cell motility and communication mechanisms, electrophysiology, patch clamping). Etc...
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