Limits to evolutionary rescue by conjugative plasmids

IF 1.2 4区 生物学 Q4 ECOLOGY Theoretical Population Biology Pub Date : 2023-11-02 DOI:10.1016/j.tpb.2023.10.001
Félix Geoffroy, Hildegard Uecker
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Abstract

Plasmids may carry genes coding for beneficial traits and thus contribute to adaptation of bacterial populations to environmental stress. Conjugative plasmids can horizontally transfer between cells, which a priori facilitates the spread of adaptive alleles. However, if the potential recipient cell is already colonized by another incompatible plasmid, successful transfer may be prevented. Competition between plasmids can thus limit horizontal transfer. Previous modeling has indeed shown that evolutionary rescue by a conjugative plasmid is hampered by incompatible resident plasmids in the population. If the rescue plasmid is a mutant variant of the resident plasmid, both plasmids transfer at the same rates. A high conjugation rate then has two, potentially opposing, effects – a direct positive effect on spread of the rescue plasmid and an increase in the fraction of resident plasmid cells. This raises the question whether a high conjugation rate always benefits evolutionary rescue. In this article, we systematically analyze three models of increasing complexity to disentangle the benefits and limits of increasing horizontal gene transfer in the presence of plasmid competition and plasmid costs. We find that the net effect can be positive or negative and that the optimal transfer rate is thus not always the highest one. These results can contribute to our understanding of the many facets of plasmid-driven adaptation and the wide range of transfer rates observed in nature.

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结合质粒拯救进化的局限性。
质粒可能携带编码有益性状的基因,从而有助于细菌种群适应环境压力。结合质粒可以在细胞之间水平转移,这先验地促进了适应性等位基因的传播。然而,如果潜在的受体细胞已经被另一个不相容的质粒定植,则可能会阻止成功的转移。质粒之间的竞争因此可以限制水平转移。先前的建模确实表明,结合质粒的进化拯救受到种群中不相容的常驻质粒的阻碍。如果救援质粒是驻留质粒的突变变体,则两个质粒以相同的速率转移。高结合率会产生两种潜在的相反影响——一种是对拯救质粒传播的直接积极影响,另一种是增加驻留质粒细胞的比例。这就提出了一个问题,即高结合率是否总是有利于进化救援。在这篇文章中,我们系统地分析了三个增加复杂性的模型,以理清在质粒竞争和质粒成本的情况下增加水平基因转移的好处和局限性。我们发现净效应可以是正的,也可以是负的,因此最优转移率并不总是最高的。这些结果有助于我们理解质粒驱动的适应的许多方面以及在自然界中观察到的广泛的转移速率。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Theoretical Population Biology
Theoretical Population Biology 生物-进化生物学
CiteScore
2.50
自引率
14.30%
发文量
43
审稿时长
6-12 weeks
期刊介绍: An interdisciplinary journal, Theoretical Population Biology presents articles on theoretical aspects of the biology of populations, particularly in the areas of demography, ecology, epidemiology, evolution, and genetics. Emphasis is on the development of mathematical theory and models that enhance the understanding of biological phenomena. Articles highlight the motivation and significance of the work for advancing progress in biology, relying on a substantial mathematical effort to obtain biological insight. The journal also presents empirical results and computational and statistical methods directly impinging on theoretical problems in population biology.
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