Backbone 1H, 15N and 13C resonance assignments for an E2 ubiquitin conjugating enzyme-UBE2T

IF 0.8 4区 生物学 Q4 BIOPHYSICS Biomolecular NMR Assignments Pub Date : 2023-09-29 DOI:10.1007/s12104-023-10154-2
Qiwei Huang, Hui Qi Ng, Yong Yao Loh, Zhiyuan Ke, Wan Hsin Lim, CongBao Kang
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Abstract

Ubiquitin-conjugating enzyme E2 T (UBE2T) plays important roles in ubiquitination of proteins through participation in transferring ubiquitin to its substrate. Due to its importance in protein modifications, UBE2T associates with diverse diseases and serves as an important target for drug discovery and development. The crystal structure of UBE2T has been determined and the structure reveals the lack of a druggable pocket for binding to small molecules for clinical applications. Despite the challenge, effort has been made to develop UBE2T inhibitors. We obtained UBE2T constructs with and without the C-terminal region which is flexible in solution. Herein, we report the backbone resonance assignments for human UBE2T without the C-terminal region. The backbone dynamics of UBE2T was also explored. The available assignments will be helpful for hit identification, determining ligand binding site and understanding the mechanism of action of UBE2T inhibitors.

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E2泛素偶联酶UBE2T的骨架1H、15N和13C共振分配
泛素结合酶E2 T(UBE2T)通过参与将泛素转移到其底物,在蛋白质的泛素化中发挥重要作用。由于其在蛋白质修饰中的重要性,UBE2T与多种疾病相关,是药物发现和开发的重要靶点。UBE2T的晶体结构已经确定,该结构揭示了临床应用中缺乏与小分子结合的可药用口袋。尽管面临挑战,人们还是努力开发UBE2T抑制剂。我们获得了具有和不具有C末端区域的UBE2T构建体,其在溶液中是柔性的。在此,我们报道了没有C末端区域的人类UBE2T的主干共振分配。还对UBE2T的骨架动力学进行了探索。可用的分配将有助于识别命中物、确定配体结合位点和了解UBE2T抑制剂的作用机制。
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来源期刊
Biomolecular NMR Assignments
Biomolecular NMR Assignments 生物-光谱学
CiteScore
1.70
自引率
11.10%
发文量
59
审稿时长
6-12 weeks
期刊介绍: Biomolecular NMR Assignments provides a forum for publishing sequence-specific resonance assignments for proteins and nucleic acids as Assignment Notes. Chemical shifts for NMR-active nuclei in macromolecules contain detailed information on molecular conformation and properties. Publication of resonance assignments in Biomolecular NMR Assignments ensures that these data are deposited into a public database at BioMagResBank (BMRB; http://www.bmrb.wisc.edu/), where they are available to other researchers. Coverage includes proteins and nucleic acids; Assignment Notes are processed for rapid online publication and are published in biannual online editions in June and December.
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