Progress Curves Analysis as an Alternative for Exploration of Activation-inhibition Phenomena in Cholinesterases

Marko Golinik
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引用次数: 3

Abstract

The kinetic behaviour of insect acetylcholinesterases deviates from the Michaelis-Menten pattern. These deviations are known as activation or inhibition at various substrate concentrations and can be more or less observable depending on mutations around the active site of the enzyme. Most kinetic studies on these enzymes still rely on initial rate measurements. It is demonstrated here that according to this method one of the deviations can be overlooked. We attempt to point out that in such cases a detailed step-by-step progress curves analysis is successful. The study is focused on two different methods of analysing progress curves: (i) the first one is based on an integrated initial rate equation which can sufficiently fit truncated progress curves under corresponding conditions; and (ii) the other one precludes the algebraic formulae, but uses numerical integration for searching a non analytical solution of ordinary differential equations describing a kinetic model. All methods are tested on three different acetylcholinesterase mutants from Drosophila melanogaster. The results indicate that kinetic parameters for the E107K mutant with highly expressive activation and inhibition can be well evaluated applying any analysis method. It is quite different for E107W and E107Y mutants where latent activation is present, but discovered only using one or the other progress curves analysis methods.
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进展曲线分析作为探索胆碱酯酶激活-抑制现象的替代方法
昆虫乙酰胆碱酯酶的动力学行为偏离Michaelis-Menten模式。这些偏差被称为在不同底物浓度下的激活或抑制,并且可以根据酶活性位点周围的突变或多或少地观察到。对这些酶的大多数动力学研究仍然依赖于初始速率测量。这里证明,根据这种方法,一个偏差是可以忽略的。我们试图指出,在这种情况下,详细的一步一步的进度曲线分析是成功的。重点研究了两种不同的进度曲线分析方法:(i)第一种方法是基于积分初始速率方程,该方程在相应条件下可以充分拟合截短的进度曲线;(ii)另一种方法排除了代数公式,而是使用数值积分来寻找描述动力学模型的常微分方程的非解析解。所有方法都在三种不同的黑腹果蝇乙酰胆碱酯酶突变体上进行了测试。结果表明,高表达激活和抑制的E107K突变体的动力学参数可以用任何分析方法很好地评估。对于存在潜伏激活的E107W和E107Y突变体来说,这是完全不同的,但只使用其中一种进展曲线分析方法来发现。
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