Dawn E Holmes, Jinjie Zhou, Jessica A Smith, Caiqin Wang, Xinying Liu, Derek R Lovley
{"title":"Different outer membrane <i>c</i>-type cytochromes are involved in direct interspecies electron transfer to <i>Geobacter</i> or <i>Methanosarcina</i> species.","authors":"Dawn E Holmes, Jinjie Zhou, Jessica A Smith, Caiqin Wang, Xinying Liu, Derek R Lovley","doi":"10.1002/mlf2.12037","DOIUrl":null,"url":null,"abstract":"<p><p>Direct interspecies electron transfer (DIET) may be most important in methanogenic environments, but mechanistic studies of DIET to date have primarily focused on cocultures in which fumarate was the terminal electron acceptor. To better understand DIET with methanogens, the transcriptome of <i>Geobacter metallireducens</i> during DIET-based growth with <i>G. sulfurreducens</i> reducing fumarate was compared with <i>G. metallireducens</i> grown in coculture with diverse <i>Methanosarcina</i>. The transcriptome of <i>G. metallireducens</i> cocultured with <i>G. sulfurreducens</i> was significantly different from those with <i>Methanosarcina</i>. Furthermore, the transcriptome of <i>G. metallireducens</i> grown with <i>Methanosarcina barkeri</i>, which lacks outer-surface <i>c</i>-type cytochromes, differed from those of <i>G. metallireducens</i> cocultured with <i>M. acetivorans</i> or <i>M. subterranea</i>, which have an outer-surface <i>c</i>-type cytochrome that serves as an electrical connect for DIET. Differences in <i>G. metallireducens</i> expression patterns for genes involved in extracellular electron transfer were particularly notable. Cocultures with <i>c</i>-type cytochrome deletion mutant strains, ∆Gmet_0930, ∆Gmet_0557 and ∆Gmet_2896, never became established with <i>G. sulfurreducens</i> but adapted to grow with all three <i>Methanosarcina</i>. Two porin-cytochrome complexes, PccF and PccG, were important for DIET; however, PccG was more important for growth with <i>Methanosarcina</i>. Unlike cocultures with <i>G. sulfurreducens</i> and <i>M. acetivorans</i>, electrically conductive pili were not needed for growth with <i>M. barkeri</i>. <i>Shewanella oneidensis</i>, another electroactive microbe with abundant outer-surface <i>c</i>-type cytochromes, did not grow via DIET. The results demonstrate that the presence of outer-surface <i>c</i>-type cytochromes does not necessarily confer the capacity for DIET and emphasize the impact of the electron-accepting partner on the physiology of the electron-donating DIET partner.</p>","PeriodicalId":94145,"journal":{"name":"mLife","volume":null,"pages":null},"PeriodicalIF":4.5000,"publicationDate":"2022-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10989804/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"mLife","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1002/mlf2.12037","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2022/9/1 0:00:00","PubModel":"eCollection","JCR":"Q1","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Direct interspecies electron transfer (DIET) may be most important in methanogenic environments, but mechanistic studies of DIET to date have primarily focused on cocultures in which fumarate was the terminal electron acceptor. To better understand DIET with methanogens, the transcriptome of Geobacter metallireducens during DIET-based growth with G. sulfurreducens reducing fumarate was compared with G. metallireducens grown in coculture with diverse Methanosarcina. The transcriptome of G. metallireducens cocultured with G. sulfurreducens was significantly different from those with Methanosarcina. Furthermore, the transcriptome of G. metallireducens grown with Methanosarcina barkeri, which lacks outer-surface c-type cytochromes, differed from those of G. metallireducens cocultured with M. acetivorans or M. subterranea, which have an outer-surface c-type cytochrome that serves as an electrical connect for DIET. Differences in G. metallireducens expression patterns for genes involved in extracellular electron transfer were particularly notable. Cocultures with c-type cytochrome deletion mutant strains, ∆Gmet_0930, ∆Gmet_0557 and ∆Gmet_2896, never became established with G. sulfurreducens but adapted to grow with all three Methanosarcina. Two porin-cytochrome complexes, PccF and PccG, were important for DIET; however, PccG was more important for growth with Methanosarcina. Unlike cocultures with G. sulfurreducens and M. acetivorans, electrically conductive pili were not needed for growth with M. barkeri. Shewanella oneidensis, another electroactive microbe with abundant outer-surface c-type cytochromes, did not grow via DIET. The results demonstrate that the presence of outer-surface c-type cytochromes does not necessarily confer the capacity for DIET and emphasize the impact of the electron-accepting partner on the physiology of the electron-donating DIET partner.