首页 > 最新文献

Population Ecology最新文献

英文 中文
Regional‐scale effects of deer‐induced forest degradation on river ecosystem dynamics 鹿引起的森林退化对河流生态系统动态的区域效应
IF 1.7 4区 环境科学与生态学 Q4 ECOLOGY Pub Date : 2024-01-08 DOI: 10.1002/1438-390x.12174
Hikaru Nakagawa, Daisuke Fujiki, Hiroo Numata, Luhan Wu, Terutaka Mori, T. Minamoto
Almost all ecosystems are open systems, meaning that significant changes in one ecosystem can lead to unexpected changes in others. Deer overabundance has become a problem worldwide, leading to forest degradation that has impacts on not only terrestrial, but also aquatic ecosystems. This study aims to investigate the regional‐scale importance of large herbivores in inter‐ecosystem interactions by examining the effects of deer‐induced forest degradation on fish populations. We selected similar‐scale catchments from river systems in Hyogo, Japan, that differed in the time since deer‐induced forest degradation. Conventional surveys for fish densities and microhabitat environments were conducted in 23 catchments, and surveys using quantitative eDNA metabarcoding were conducted in 95 catchments. We examined the relationships between fish population densities, microhabitats, and time since forest degradation, considering confounding effects. Data from 8 and 17 fish taxa detected by snorkeling and eDNA methods, respectively, were available for statistical analysis. Snorkeling‐counts (Individuals/1 m transect) and eDNA concentrations (Copies/L) in river water were strongly correlated. Fine sediments on riverbeds were increased in the 3–15 years following forest degradation and decreased after 16 years. Population densities of sand‐preferring fishes, as inferred from both eDNA and snorkeling, reasonably followed this pattern. These patterns may be caused by the depletion of fine sediments on mountain slopes. The results of this study suggest that deer‐induced worldwide alternation may also occur in aquatic ecosystems.
几乎所有生态系统都是开放系统,这意味着一个生态系统的重大变化会导致其他生态系统发生意想不到的变化。鹿的过度繁殖已成为一个全球性问题,导致森林退化,不仅影响陆地生态系统,也影响水生生态系统。本研究旨在通过考察鹿引起的森林退化对鱼类种群的影响,研究大型食草动物在生态系统间相互作用中的区域尺度重要性。我们从日本兵库县的河流系统中选择了类似规模的集水区,这些集水区在鹿引起的森林退化后的时间上有所不同。我们在 23 个集水区进行了鱼类密度和微生境环境的常规调查,并在 95 个集水区进行了定量 eDNA 代谢编码调查。考虑到混杂效应,我们研究了鱼类种群密度、微生境和森林退化时间之间的关系。通过浮潜和 eDNA 方法分别检测到的 8 种和 17 种鱼类分类群的数据可用于统计分析。浮潜计数(个体/1 米横断面)与河水中的 eDNA 浓度(拷贝数/升)密切相关。河床上的细小沉积物在森林退化后的 3-15 年间有所增加,16 年后有所减少。根据 eDNA 和浮潜推断,喜沙鱼类的种群密度也合理地遵循了这一规律。这些模式可能是山坡上细小沉积物枯竭造成的。这项研究的结果表明,鹿引起的世界范围内的交替也可能发生在水生生态系统中。
{"title":"Regional‐scale effects of deer‐induced forest degradation on river ecosystem dynamics","authors":"Hikaru Nakagawa, Daisuke Fujiki, Hiroo Numata, Luhan Wu, Terutaka Mori, T. Minamoto","doi":"10.1002/1438-390x.12174","DOIUrl":"https://doi.org/10.1002/1438-390x.12174","url":null,"abstract":"Almost all ecosystems are open systems, meaning that significant changes in one ecosystem can lead to unexpected changes in others. Deer overabundance has become a problem worldwide, leading to forest degradation that has impacts on not only terrestrial, but also aquatic ecosystems. This study aims to investigate the regional‐scale importance of large herbivores in inter‐ecosystem interactions by examining the effects of deer‐induced forest degradation on fish populations. We selected similar‐scale catchments from river systems in Hyogo, Japan, that differed in the time since deer‐induced forest degradation. Conventional surveys for fish densities and microhabitat environments were conducted in 23 catchments, and surveys using quantitative eDNA metabarcoding were conducted in 95 catchments. We examined the relationships between fish population densities, microhabitats, and time since forest degradation, considering confounding effects. Data from 8 and 17 fish taxa detected by snorkeling and eDNA methods, respectively, were available for statistical analysis. Snorkeling‐counts (Individuals/1 m transect) and eDNA concentrations (Copies/L) in river water were strongly correlated. Fine sediments on riverbeds were increased in the 3–15 years following forest degradation and decreased after 16 years. Population densities of sand‐preferring fishes, as inferred from both eDNA and snorkeling, reasonably followed this pattern. These patterns may be caused by the depletion of fine sediments on mountain slopes. The results of this study suggest that deer‐induced worldwide alternation may also occur in aquatic ecosystems.","PeriodicalId":54597,"journal":{"name":"Population Ecology","volume":"16 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2024-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139446809","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Population Ecology 2024 Editorial 人口生态学 2024》社论
IF 1.7 4区 环境科学与生态学 Q4 ECOLOGY Pub Date : 2023-12-17 DOI: 10.1002/1438-390x.12173
Atsushi Yamauchi
{"title":"Population Ecology 2024 Editorial","authors":"Atsushi Yamauchi","doi":"10.1002/1438-390x.12173","DOIUrl":"https://doi.org/10.1002/1438-390x.12173","url":null,"abstract":"","PeriodicalId":54597,"journal":{"name":"Population Ecology","volume":"9 5","pages":""},"PeriodicalIF":1.7,"publicationDate":"2023-12-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138965767","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correction to “A primer of community ecology using the R language” 对 "使用 R 语言的群落生态学入门 "的更正
IF 1.7 4区 环境科学与生态学 Q4 ECOLOGY Pub Date : 2023-12-15 DOI: 10.1002/1438-390x.12175
{"title":"Correction to “A primer of community ecology using the R language”","authors":"","doi":"10.1002/1438-390x.12175","DOIUrl":"https://doi.org/10.1002/1438-390x.12175","url":null,"abstract":"","PeriodicalId":54597,"journal":{"name":"Population Ecology","volume":"30 119","pages":""},"PeriodicalIF":1.7,"publicationDate":"2023-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138998985","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Restoring eastern hellbender (Cryptobranchus a. alleganiensis) populations through translocation of headstarted individuals 通过迁移起始个体恢复东部地狱蛙(Cryptobranchus a. alleganiensis)种群
IF 1.7 4区 环境科学与生态学 Q4 ECOLOGY Pub Date : 2023-11-20 DOI: 10.1002/1438-390x.12171
Matthew D. Kaunert, Ryan K. Brown, Stephen Spear, Peter B. Johantgen, V. Popescu
Freshwater biodiversity is declining at a fast pace despite significant efforts directed toward the management and conservation of aquatic systems. Eastern hellbenders are one of North America's most iconic stream amphibian species, a sentinel of stream health, and are experiencing rapid population declines throughout most of their range. Common conservation strategies include headstarting; however, the success of this strategy for rebuilding hellbender populations and the most optimal release scenarios have largely been unassessed. We use a cohort of 205 animals released in several Ohio watersheds to evaluate the success of headstarting and reintroduction efforts over 3 years. Using PIT‐tag surveys over 25 occasions between July 2018 and November 2021 and capture–recapture models, we found that 3‐year apparent survival post‐release was 0.162 ± 0.061, with lower survival in year 1 (0.383 ± 0.058) and greater in years 2 (0.696 ± 0.086) and 3 (0.609 ± 0.154). Using demographic simulations, we found that releasing cohorts of N = 100 individuals at fewer suitable sites several times (e.g., 3 releases, 2 or 3 years apart) would be a better strategy compared to single release events across multiple sites. Additional simulations showed that eastern hellbender headstarting programs using wild eggs can be highly beneficial in producing more animals reaching adulthood (up to 7 times, if survival in captivity is assumed to be 100%) compared to development in the wild. This study emphasizes the need to monitor the success of reintroduction programs and provides evidence that headstarting can be a viable strategy for rebuilding eastern hellbender populations.
尽管人们在水生系统的管理和保护方面做出了巨大努力,但淡水生物多样性仍在快速下降。东部地狱蛙是北美最具代表性的溪流两栖动物之一,也是溪流健康的哨兵,但在其分布的大部分地区,其种群数量正在迅速下降。常见的保护策略包括起步放流;然而,这种策略在重建地狱蛙种群方面的成功率以及最理想的放流方案在很大程度上尚未得到评估。我们利用在俄亥俄州几个流域释放的 205 只动物组成的队列,来评估为期 3 年的起头和重新引入工作的成功与否。利用 2018 年 7 月至 2021 年 11 月期间 25 次的 PIT 标签调查和捕获-再捕获模型,我们发现释放后 3 年的表观存活率为 0.162 ± 0.061,第 1 年的存活率较低(0.383 ± 0.058),而第 2 年(0.696 ± 0.086)和第 3 年(0.609 ± 0.154)的存活率较高。通过人口学模拟,我们发现,与在多个地点进行单次释放相比,在较少的合适地点多次释放 N = 100 个个体(例如,相隔 2 或 3 年释放 3 次)将是更好的策略。其他模拟结果表明,与在野外发育相比,利用野生卵进行东部地狱蛙起步计划非常有益,能培育出更多的成年动物(如果假定圈养存活率为100%,则可达7倍)。这项研究强调了监测再引入计划成功与否的必要性,并提供了证据,证明头部启动是重建东部地狱蛙种群的可行策略。
{"title":"Restoring eastern hellbender (Cryptobranchus a. alleganiensis) populations through translocation of headstarted individuals","authors":"Matthew D. Kaunert, Ryan K. Brown, Stephen Spear, Peter B. Johantgen, V. Popescu","doi":"10.1002/1438-390x.12171","DOIUrl":"https://doi.org/10.1002/1438-390x.12171","url":null,"abstract":"Freshwater biodiversity is declining at a fast pace despite significant efforts directed toward the management and conservation of aquatic systems. Eastern hellbenders are one of North America's most iconic stream amphibian species, a sentinel of stream health, and are experiencing rapid population declines throughout most of their range. Common conservation strategies include headstarting; however, the success of this strategy for rebuilding hellbender populations and the most optimal release scenarios have largely been unassessed. We use a cohort of 205 animals released in several Ohio watersheds to evaluate the success of headstarting and reintroduction efforts over 3 years. Using PIT‐tag surveys over 25 occasions between July 2018 and November 2021 and capture–recapture models, we found that 3‐year apparent survival post‐release was 0.162 ± 0.061, with lower survival in year 1 (0.383 ± 0.058) and greater in years 2 (0.696 ± 0.086) and 3 (0.609 ± 0.154). Using demographic simulations, we found that releasing cohorts of N = 100 individuals at fewer suitable sites several times (e.g., 3 releases, 2 or 3 years apart) would be a better strategy compared to single release events across multiple sites. Additional simulations showed that eastern hellbender headstarting programs using wild eggs can be highly beneficial in producing more animals reaching adulthood (up to 7 times, if survival in captivity is assumed to be 100%) compared to development in the wild. This study emphasizes the need to monitor the success of reintroduction programs and provides evidence that headstarting can be a viable strategy for rebuilding eastern hellbender populations.","PeriodicalId":54597,"journal":{"name":"Population Ecology","volume":"1 1","pages":""},"PeriodicalIF":1.7,"publicationDate":"2023-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139257167","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of selective logging on genetic diversity and population structure of a keystone mistletoe 选择性采伐对楔石槲寄生遗传多样性和种群结构的影响
4区 环境科学与生态学 Q4 ECOLOGY Pub Date : 2023-11-07 DOI: 10.1002/1438-390x.12170
Francisco E. Fontúrbel, Héctor González‐Ancin, Noemí Rojas‐Hernández, Caren Vega‐Retter
Abstract The effects of habitat degradation remain not fully understood. A recent study reported low effects of habitat degradation on plant genetic diversity but indicates that reduction in habitat quality could impact it as well as gene flow indirectly via ecological interactions. Selective logging is a way of habitat degradation, but studies examining its effects on plant genetic diversity on non‐logged forest plant species are relatively scarce. Using 3470 single‐nucleotide polymorphisms, we assess the effects of different selective logging intensities on the genetic diversity of 66 individuals of a keystone mistletoe ( Tristerix corymbosus ). We also examined the possible relationship with its seed disperser ( Dromiciops gliroides ) abundance in three sites of the temperate rainforests of southern Chile, with different levels of selective logging intensity. Our results show that selective logging increases allelic richness and inbreeding in this mistletoe; inbreeding increased with selective logging intensity, and heterozygosity decreased with D. gliroides abundance. While wood extraction seems to positively affect T. corymbosus genetic diversity, its long‐term consequences—such as increased inbreeding—are yet to be assessed in future studies.
生境退化的影响尚未得到充分认识。最近的一项研究表明,生境退化对植物遗传多样性的影响较小,但生境质量的降低可能通过生态相互作用间接影响植物遗传多样性和基因流动。选择性采伐是生境退化的一种方式,但其对非采伐森林植物物种遗传多样性影响的研究相对较少。利用3470个单核苷酸多态性,我们评估了不同选择采伐强度对66个梯形槲寄生(Tristerix corymbosus)遗传多样性的影响。我们还研究了在智利南部温带雨林的三个地点,在不同程度的选择性砍伐强度下,其种子传播者(Dromiciops gliroides)丰度的可能关系。结果表明,选择性采伐增加了该槲寄生的等位基因丰富度和近交;近交随选择采伐强度的增加而增加,杂合度随选择采伐强度的增加而降低。虽然木材提取似乎积极地影响了松木的遗传多样性,但其长期后果,如增加近亲繁殖,还有待于在未来的研究中评估。
{"title":"Effects of selective logging on genetic diversity and population structure of a keystone mistletoe","authors":"Francisco E. Fontúrbel, Héctor González‐Ancin, Noemí Rojas‐Hernández, Caren Vega‐Retter","doi":"10.1002/1438-390x.12170","DOIUrl":"https://doi.org/10.1002/1438-390x.12170","url":null,"abstract":"Abstract The effects of habitat degradation remain not fully understood. A recent study reported low effects of habitat degradation on plant genetic diversity but indicates that reduction in habitat quality could impact it as well as gene flow indirectly via ecological interactions. Selective logging is a way of habitat degradation, but studies examining its effects on plant genetic diversity on non‐logged forest plant species are relatively scarce. Using 3470 single‐nucleotide polymorphisms, we assess the effects of different selective logging intensities on the genetic diversity of 66 individuals of a keystone mistletoe ( Tristerix corymbosus ). We also examined the possible relationship with its seed disperser ( Dromiciops gliroides ) abundance in three sites of the temperate rainforests of southern Chile, with different levels of selective logging intensity. Our results show that selective logging increases allelic richness and inbreeding in this mistletoe; inbreeding increased with selective logging intensity, and heterozygosity decreased with D. gliroides abundance. While wood extraction seems to positively affect T. corymbosus genetic diversity, its long‐term consequences—such as increased inbreeding—are yet to be assessed in future studies.","PeriodicalId":54597,"journal":{"name":"Population Ecology","volume":"80 S1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135539968","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Properties and interpretation of the Skellam model—A discrete‐time contest competition population model Skellam模型的性质和解释——离散时间竞争种群模型
4区 环境科学与生态学 Q4 ECOLOGY Pub Date : 2023-10-06 DOI: 10.1002/1438-390x.12169
Jurģis Šuba, Yukichika Kawata, Andreas Lindén
Abstract The Skellam model describes discrete‐time population dynamics of a single species assuming uniform (i.e., random or Poissonian) individual distribution and intraspecific contest competition. Apart from studies on individual‐based models derived from first principles it has been rarely applied in ecological research although in specific situations it may be more appropriate than, for instance, the frequently used Ricker model, which is derived assuming scramble competition among the individuals. In this article, we offer an insight into the first principles underlying the Skellam model and provide an alternative parameterization of the model in terms of two commonly used parameters: intrinsic rate of population increase and carrying capacity. We also provide guidelines and software for fitting the Skellam model to discrete population time series data. In light of these findings, the Skellam model may be a useful alternative for a range of purposes where it has been earlier overlooked.
Skellam模型描述了单个物种的离散时间种群动态,假设均匀(即随机或泊松)个体分布和种内竞争。除了基于第一原理的基于个体的模型的研究之外,它很少应用于生态研究,尽管在特定情况下,它可能比经常使用的里克模型更合适,例如,里克模型是在假设个体之间的争夺竞争的情况下推导出来的。在本文中,我们深入了解了Skellam模型的基本原理,并根据两个常用参数提供了该模型的另一种参数化方法:人口的内在增长率和承载能力。我们还提供了将Skellam模型拟合到离散人口时间序列数据的指南和软件。鉴于这些发现,Skellam模型可能是一个有用的替代方案,用于一系列之前被忽视的目的。
{"title":"Properties and interpretation of the Skellam model—A discrete‐time contest competition population model","authors":"Jurģis Šuba, Yukichika Kawata, Andreas Lindén","doi":"10.1002/1438-390x.12169","DOIUrl":"https://doi.org/10.1002/1438-390x.12169","url":null,"abstract":"Abstract The Skellam model describes discrete‐time population dynamics of a single species assuming uniform (i.e., random or Poissonian) individual distribution and intraspecific contest competition. Apart from studies on individual‐based models derived from first principles it has been rarely applied in ecological research although in specific situations it may be more appropriate than, for instance, the frequently used Ricker model, which is derived assuming scramble competition among the individuals. In this article, we offer an insight into the first principles underlying the Skellam model and provide an alternative parameterization of the model in terms of two commonly used parameters: intrinsic rate of population increase and carrying capacity. We also provide guidelines and software for fitting the Skellam model to discrete population time series data. In light of these findings, the Skellam model may be a useful alternative for a range of purposes where it has been earlier overlooked.","PeriodicalId":54597,"journal":{"name":"Population Ecology","volume":"1 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"134943819","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Announcement of the 4th Population Ecology Awards 第四届人口生态奖公布
4区 环境科学与生态学 Q4 ECOLOGY Pub Date : 2023-10-01 DOI: 10.1002/1438-390x.12166
Population EcologyVolume 65, Issue 4 p. 275-278 AWARD ANNOUNCEMENT Announcement of the 4th Population Ecology Awards First published: 06 October 2023 https://doi.org/10.1002/1438-390X.12166Read the full textAboutPDF ToolsRequest permissionExport citationAdd to favoritesTrack citation ShareShare Give accessShare full text accessShare full-text accessPlease review our Terms and Conditions of Use and check box below to share full-text version of article.I have read and accept the Wiley Online Library Terms and Conditions of UseShareable LinkUse the link below to share a full-text version of this article with your friends and colleagues. Learn more.Copy URL Share a linkShare onEmailFacebookTwitterLinkedInRedditWechat Volume65, Issue4October 2023Pages 275-278 RelatedInformation
人口生态学第65卷第4期275-278页奖励公告第四届人口生态学奖公告首次发布:2023年10月6日https://doi.org/10.1002/1438-390X.12166Read全文taboutpdf ToolsRequest permissionExport citationAdd to favoritesTrack citation ShareShare给予accessShare全文accessShare全文accessShare请查看我们的使用条款和条件,并勾选下面的复选框分享文章的全文版本。我已经阅读并接受了Wiley在线图书馆使用共享链接的条款和条件,请使用下面的链接与您的朋友和同事分享本文的全文版本。学习更多的知识。复制URL共享一个链接共享一个emailfacebooktwitterlinkedinreddit微信卷65,Issue4October 2023页275-278相关信息
{"title":"Announcement of the 4th Population Ecology Awards","authors":"","doi":"10.1002/1438-390x.12166","DOIUrl":"https://doi.org/10.1002/1438-390x.12166","url":null,"abstract":"Population EcologyVolume 65, Issue 4 p. 275-278 AWARD ANNOUNCEMENT Announcement of the 4th Population Ecology Awards First published: 06 October 2023 https://doi.org/10.1002/1438-390X.12166Read the full textAboutPDF ToolsRequest permissionExport citationAdd to favoritesTrack citation ShareShare Give accessShare full text accessShare full-text accessPlease review our Terms and Conditions of Use and check box below to share full-text version of article.I have read and accept the Wiley Online Library Terms and Conditions of UseShareable LinkUse the link below to share a full-text version of this article with your friends and colleagues. Learn more.Copy URL Share a linkShare onEmailFacebookTwitterLinkedInRedditWechat Volume65, Issue4October 2023Pages 275-278 RelatedInformation","PeriodicalId":54597,"journal":{"name":"Population Ecology","volume":"155 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135567702","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Acknowledgements to reviewers and editors 感谢审稿人和编辑
4区 环境科学与生态学 Q4 ECOLOGY Pub Date : 2023-10-01 DOI: 10.1002/1438-390x.12168
Population EcologyVolume 65, Issue 4 p. 279-280 REVIEWER ACKNOWLEDGEMENT Acknowledgements to reviewers and editors First published: 06 October 2023 https://doi.org/10.1002/1438-390X.12168Read the full textAboutPDF ToolsRequest permissionExport citationAdd to favoritesTrack citation ShareShare Give accessShare full text accessShare full-text accessPlease review our Terms and Conditions of Use and check box below to share full-text version of article.I have read and accept the Wiley Online Library Terms and Conditions of UseShareable LinkUse the link below to share a full-text version of this article with your friends and colleagues. Learn more.Copy URL Share a linkShare onEmailFacebookTwitterLinkedInRedditWechat No abstract is available for this article. Volume65, Issue4October 2023Pages 279-280 RelatedInformation
Population ecology第65卷第4期第279-280页审稿人致谢审稿人和编辑首次发布:2023年10月6日https://doi.org/10.1002/1438-390X.12168Read全文taboutpdf ToolsRequest permissionExport citationAdd to favoritesTrack citation ShareShare给予accessShare全文accessShare全文accessShare全文accessShare请查看我们的使用条款和条件,并勾选下面的复选框共享文章的全文版本。我已经阅读并接受了Wiley在线图书馆使用共享链接的条款和条件,请使用下面的链接与您的朋友和同事分享本文的全文版本。学习更多的知识。复制URL共享链接共享一个emailfacebooktwitterlinkedinreddit微信本文无摘要vol . 65, Issue4October 2023页279-280
{"title":"Acknowledgements to reviewers and editors","authors":"","doi":"10.1002/1438-390x.12168","DOIUrl":"https://doi.org/10.1002/1438-390x.12168","url":null,"abstract":"Population EcologyVolume 65, Issue 4 p. 279-280 REVIEWER ACKNOWLEDGEMENT Acknowledgements to reviewers and editors First published: 06 October 2023 https://doi.org/10.1002/1438-390X.12168Read the full textAboutPDF ToolsRequest permissionExport citationAdd to favoritesTrack citation ShareShare Give accessShare full text accessShare full-text accessPlease review our Terms and Conditions of Use and check box below to share full-text version of article.I have read and accept the Wiley Online Library Terms and Conditions of UseShareable LinkUse the link below to share a full-text version of this article with your friends and colleagues. Learn more.Copy URL Share a linkShare onEmailFacebookTwitterLinkedInRedditWechat No abstract is available for this article. Volume65, Issue4October 2023Pages 279-280 RelatedInformation","PeriodicalId":54597,"journal":{"name":"Population Ecology","volume":"14 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135567703","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Estimating current effective sizes of large populations from a single sample of genomic marker data: A comparison of estimators by simulations 从单个基因组标记数据样本估计当前大种群的有效规模:模拟估算器的比较
4区 环境科学与生态学 Q4 ECOLOGY Pub Date : 2023-09-19 DOI: 10.1002/1438-390x.12167
Jinliang Wang
Abstract Genome‐wide single nucleotide polymorphisms (SNPs) data are increasingly used in estimating the current effective population sizes ( N e ) for informing the conservation of endangered species and guiding the management of exploited species. Previous assessments of sibship frequency (SF) and linkage disequilibrium (LD) estimators of N e focused on small populations where genetic drift is strong and thus N e is easy to estimate. Genomic single nucleotide polymorphism (SNP) data provide ample information and hold the potential for application of these estimators to large populations where genetic drift is rather weak and thus N e is difficult to estimate. In this study, I simulated very large populations and sampled a widely variable number of individuals (genotyped at 10,000 SNPs) for estimating N e by both SF and LD methods. I also considered the more realistic situation where a population experiences a bottleneck, and where marker data suffer from genotyping errors. The simulations show that both SF and LD methods can yield accurate N e estimates of very large populations when sampled individuals are sufficiently numerous. When n is much smaller than N e , however, N e estimates are in a bimodal distribution with a substantial proportion of the estimates being infinitely large. For a population with a bottleneck, LD estimator overestimates and underestimates the N e of the parental population from samples taken at and after the bottleneck, respectively. LD estimator also overestimates N e substantially when applied to data suffering from allelic dropouts and false alleles. In contrast, SF estimator is unbiased and accurate when populations are changing in size or markers suffer from genotyping errors.
全基因组单核苷酸多态性(snp)数据越来越多地用于估计当前有效种群大小(N e),为濒危物种保护和指导开发物种管理提供信息。以往的兄弟姐妹频率(SF)和连锁不平衡(LD)估计集中在遗传漂变强的小群体,因此N e很容易估计。基因组单核苷酸多态性(SNP)数据提供了充足的信息,并具有将这些估计器应用于遗传漂变相当弱的大群体的潜力,因此N e难以估计。在这项研究中,我模拟了非常大的种群,并采样了大量可变的个体(基因分型为10,000个snp),以便通过SF和LD方法估计N - e。我还考虑了更现实的情况,即群体经历瓶颈,标记数据遭受基因分型错误。模拟结果表明,当样本数量足够多时,SF和LD方法都能对非常大的种群产生准确的N - e估计。然而,当n远远小于nne时,nne的估计值呈双峰分布,其中相当大比例的估计值为无限大。对于有瓶颈的种群,LD估计器分别高估和低估了在瓶颈处和瓶颈后采样的亲本种群的N e。LD估计器在应用于存在等位基因缺失和假等位基因的数据时,也会大大高估N e。相比之下,SF估计是无偏和准确的,当群体的大小变化或标记遭受基因分型错误。
{"title":"Estimating current effective sizes of large populations from a single sample of genomic marker data: A comparison of estimators by simulations","authors":"Jinliang Wang","doi":"10.1002/1438-390x.12167","DOIUrl":"https://doi.org/10.1002/1438-390x.12167","url":null,"abstract":"Abstract Genome‐wide single nucleotide polymorphisms (SNPs) data are increasingly used in estimating the current effective population sizes ( N e ) for informing the conservation of endangered species and guiding the management of exploited species. Previous assessments of sibship frequency (SF) and linkage disequilibrium (LD) estimators of N e focused on small populations where genetic drift is strong and thus N e is easy to estimate. Genomic single nucleotide polymorphism (SNP) data provide ample information and hold the potential for application of these estimators to large populations where genetic drift is rather weak and thus N e is difficult to estimate. In this study, I simulated very large populations and sampled a widely variable number of individuals (genotyped at 10,000 SNPs) for estimating N e by both SF and LD methods. I also considered the more realistic situation where a population experiences a bottleneck, and where marker data suffer from genotyping errors. The simulations show that both SF and LD methods can yield accurate N e estimates of very large populations when sampled individuals are sufficiently numerous. When n is much smaller than N e , however, N e estimates are in a bimodal distribution with a substantial proportion of the estimates being infinitely large. For a population with a bottleneck, LD estimator overestimates and underestimates the N e of the parental population from samples taken at and after the bottleneck, respectively. LD estimator also overestimates N e substantially when applied to data suffering from allelic dropouts and false alleles. In contrast, SF estimator is unbiased and accurate when populations are changing in size or markers suffer from genotyping errors.","PeriodicalId":54597,"journal":{"name":"Population Ecology","volume":"24 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135106630","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Frequency‐dependent community dynamics driven by sexual interactions 由性互动驱动的频率依赖的群落动态
4区 环境科学与生态学 Q4 ECOLOGY Pub Date : 2023-09-11 DOI: 10.1002/1438-390x.12165
Masato Yamamichi, Kaoru Tsuji, Shoko Sakai, Erik I. Svensson
Abstract Research in community ecology has tended to focus on trophic interactions (e.g., predation, resource competition) as driving forces of community dynamics, and sexual interactions have often been overlooked. Here we discuss how sexual interactions can affect community dynamics, especially focusing on frequency‐dependent dynamics of horizontal communities (i.e., communities of competing species in a single ecological guild). By combining mechanistic and phenomenological models of competition, we place sexual reproduction into the framework of modern coexistence theory. First, we review how population dynamics of two species competing for two resources can be represented by the Lotka–Volterra competition model as well as frequency dynamics, and how niche differentiation and overlap produce negative and positive frequency‐dependence (i.e., stable coexistence and priority effect), respectively. Then, we explore two situations where sexual interactions change the frequency‐dependence in community dynamics: (1) reproductive interference, that is, negative interspecific interactions due to incomplete species recognition in mating trials, can promote positive frequency‐dependence and (2) density‐dependent intraspecific adaptation load, that is, reduced population growth rates due to adaptation to intraspecific sexual (or social) interactions, produces negative frequency‐dependence. We show how reproductive interference and density‐dependent intraspecific adaptation load can decrease and increase niche differences in the framework of modern coexistence theory, respectively. Finally, we discuss future empirical and theoretical approaches for studying how sexual interactions and related phenomena (e.g., reproductive interference, intraspecific adaptation load, and sexual dimorphism) driven by sexual selection and conflict can affect community dynamics.
群落生态学的研究往往侧重于营养相互作用(如捕食、资源竞争)作为群落动态的驱动力,而性相互作用往往被忽视。在这里,我们讨论了性互动如何影响群落动态,特别是关注水平群落(即单一生态群落中竞争物种的群落)的频率依赖动态。通过结合竞争的机制模型和现象学模型,我们将有性生殖置于现代共存理论的框架中。首先,我们回顾了Lotka-Volterra竞争模型和频率动态如何表示两种物种竞争两种资源的种群动态,以及生态位分化和重叠如何分别产生负频率依赖和正频率依赖(即稳定共存和优先效应)。然后,我们探讨了两性互动改变群落动态中频率依赖性的两种情况:(1)生殖干扰,即由于交配试验中物种识别不完全而导致的负种间相互作用,可以促进正频率依赖性;(2)密度依赖性种内适应负荷,即由于适应种内两性(或社会)相互作用而导致的种群增长率降低,产生负频率依赖性。在现代共存理论的框架下,我们分别展示了生殖干扰和密度依赖的种内适应负荷如何减少和增加生态位差异。最后,我们讨论了未来研究由性选择和性冲突驱动的性互动和相关现象(如生殖干扰、种内适应负荷和两性二态性)如何影响群落动态的实证和理论方法。
{"title":"Frequency‐dependent community dynamics driven by sexual interactions","authors":"Masato Yamamichi, Kaoru Tsuji, Shoko Sakai, Erik I. Svensson","doi":"10.1002/1438-390x.12165","DOIUrl":"https://doi.org/10.1002/1438-390x.12165","url":null,"abstract":"Abstract Research in community ecology has tended to focus on trophic interactions (e.g., predation, resource competition) as driving forces of community dynamics, and sexual interactions have often been overlooked. Here we discuss how sexual interactions can affect community dynamics, especially focusing on frequency‐dependent dynamics of horizontal communities (i.e., communities of competing species in a single ecological guild). By combining mechanistic and phenomenological models of competition, we place sexual reproduction into the framework of modern coexistence theory. First, we review how population dynamics of two species competing for two resources can be represented by the Lotka–Volterra competition model as well as frequency dynamics, and how niche differentiation and overlap produce negative and positive frequency‐dependence (i.e., stable coexistence and priority effect), respectively. Then, we explore two situations where sexual interactions change the frequency‐dependence in community dynamics: (1) reproductive interference, that is, negative interspecific interactions due to incomplete species recognition in mating trials, can promote positive frequency‐dependence and (2) density‐dependent intraspecific adaptation load, that is, reduced population growth rates due to adaptation to intraspecific sexual (or social) interactions, produces negative frequency‐dependence. We show how reproductive interference and density‐dependent intraspecific adaptation load can decrease and increase niche differences in the framework of modern coexistence theory, respectively. Finally, we discuss future empirical and theoretical approaches for studying how sexual interactions and related phenomena (e.g., reproductive interference, intraspecific adaptation load, and sexual dimorphism) driven by sexual selection and conflict can affect community dynamics.","PeriodicalId":54597,"journal":{"name":"Population Ecology","volume":"12 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-09-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135982482","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Population Ecology
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1