Molecular Docking Study to Identify Potent Inhibitors of Alpha-synuclein Aggregation of Parkinson’s Disease

E. Gupta, Shradheya R. R. Gupta, Abhijeet Kumar, Anmol Kulshreshtha, R. R. Niraj
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引用次数: 1

Abstract

Introduction: Parkinson’s disease (PD) is the widespread neurodegenerative disorder ranked second in this categories and PD is also the most common movement disorder. PD disorder affects more than 0.1% of the total population older than 40 years of age. Contemporary, therapies of PD are restricted to only symptomatic relief without dealing with the basic disease etiology such as aggregation of αSyn, thus the progression of the disease continues with the current therapies. The major objective of this study was to find out putative inhibitors of human alfa-synuclein to search possible therapeutics of Parkinson’s disease. Material and Methods: Our study included Molecular docking study of 3D-Structure of alfasynuclein of human retrieved from PDB with their chemical ligands. The proteinligands docking were performed using AutoDock4.2.5.1. Further, Molecular Dynamic Simulation for protein-ligand complex of best dock complex was carried out using Gromacs16.10. Result: Total nineteen molecules was selected for docking study out of which Amento flavones molecule shows best binding. The molecular docking simulation results indicate that the protein complexes were stable throughout MD simulations and thus proteins possess the ability to stability. Conclusion: This study provides an insight of in-silico drug designing approach towards alfasynuclein modulators as a promising therapeutics of Parkinson’s’s disease.
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识别帕金森病α -突触核蛋白聚集有效抑制剂的分子对接研究
简介:帕金森病(PD)是在这一类别中排名第二的广泛存在的神经退行性疾病,也是最常见的运动障碍。PD障碍影响40岁以上总人口的0.1%以上。目前,PD的治疗仅限于症状的缓解,而没有处理基本的疾病病因,如αSyn的聚集,因此疾病的进展继续与目前的治疗方法。本研究的主要目的是发现人类α -突触核蛋白的推定抑制剂,以寻找帕金森病的可能治疗方法。材料与方法:我们的研究包括从PDB中提取的人alfasy核蛋白与其化学配体的3d结构的分子对接研究。使用AutoDock4.2.5.1进行蛋白配体对接。进一步,利用Gromacs16.10对最佳码头配合物的蛋白质-配体配合物进行分子动力学模拟。结果:共选择19个分子进行对接研究,其中阿门托黄酮分子结合效果最好。分子对接模拟结果表明,在整个MD模拟过程中,蛋白质复合物是稳定的,因此蛋白质具有稳定能力。结论:本研究为alfasynuclein调节剂作为一种有前景的帕金森病治疗药物提供了一种计算机药物设计方法。
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