Prevalence of Multidrug Resistant Bloodstream Bacterial Infections among Hospitalized COVID-19 Egyptian Patients and Evaluation of Predictors for Case Severity

S. El-Hefnawy, Amal A. El-Koa, A. Sleem, Nehad Elsaid, Mai M. El Kalashy
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Abstract

Background and Aim: Coronaviruses are dangerous human and animal pathogens. It is characterized by fast spread, starting as an epidemic through China, followed by a worldwide pandemic. This study aimed to determine the prevalence of laboratory proven blood stream bacterial co-infection in hospitalized adult COVID-19 Egyptian patients and to recognize antibiotic susceptibilities of identified pathogens together with evaluation of predictors for case severity.Methods: The study involved 142 adult COVID-19 Egyptian patients. The diagnosis was confirmed by quantitative or real time polymerase chain reaction (PCR) on nasopharyngeal swabs. For each case two blood cultures were taken after ≥ 3 days of hospital admission. Results:About 30% of positive blood cultures showed Gram positive staphylococci while Gram negative bacilli were detected by 70% (Klebsiella ;30%, E.coli ; 20% and Pseudomonas ; 20%). Variable resistance patterns were noticed in all bacterial isolates.Blood stream infections (BSI) were identified in 40 cases (28%). About 70% of them were males. The mean age significantly associated with BSI was 63.5±18.2 years old. Hypertension and diabetes had high significant association with BSI by 55% and 60% respectively. Significantly 68% of mechanically ventilated COVID cases were BSI complicated. Death was the fate of 57.5% of BSI positive COVID cases significantly with low O2 saturation and prolonged hospital stay (21.6±3.52 days). Conclusion: All blood stream bacterial pathogens were multidrug resistant. Infections were detected among old aged, diabetic, hypertensive and mechanically ventilated patients. Prescribing antibiotics in COVID patients should be guided by careful clinical and laboratory assessment to improve their management and outcomes. Keywords
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埃及住院COVID-19患者多药耐药血流细菌感染的流行及病例严重程度预测因素的评估
背景与目的:冠状病毒是人类和动物的危险病原体。它的特点是传播迅速,首先在中国流行,然后在全球范围内流行。本研究旨在确定住院的成人COVID-19埃及患者中实验室证实的血流细菌合并感染的患病率,识别已鉴定病原体的抗生素敏感性,并评估病例严重程度的预测因素。方法:本研究纳入142例埃及成年COVID-19患者。采用鼻咽拭子定量或实时聚合酶链反应(PCR)确诊。每例患者住院≥3天后进行两次血培养。结果:革兰氏阳性葡萄球菌检出率为30%,革兰氏阴性杆菌检出率为70%(克雷伯氏菌检出率为30%,大肠杆菌检出率为30%;20%和假单胞菌;20%)。在所有细菌分离株中都发现了不同的耐药模式。血流感染(BSI) 40例(28%)。其中约70%是男性。与BSI显著相关的平均年龄为63.5±18.2岁。高血压和糖尿病与BSI的相关性分别为55%和60%。值得注意的是,68%的机械通气病例为BSI并发症。BSI阳性病例死亡占57.5%,血氧饱和度低,住院时间延长(21.6±3.52 d)。结论:所有血流病原菌均具有多重耐药。在老年人、糖尿病患者、高血压患者和机械通气患者中检测到感染。对新冠肺炎患者的抗生素处方应以仔细的临床和实验室评估为指导,以改善其管理和结果。关键字
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