Artificial intelligence-based non-invasive tumor segmentation, grade stratification and prognosis prediction for clear-cell renal-cell carcinoma.

IF 3 3区 物理与天体物理 Q2 PHYSICS, MULTIDISCIPLINARY Annals of Physics Pub Date : 2023-08-17 eCollection Date: 2023-09-01 DOI:10.1093/pcmedi/pbad019
Siteng Chen, Dandan Song, Lei Chen, Tuanjie Guo, Beibei Jiang, Aie Liu, Xianpan Pan, Tao Wang, Heting Tang, Guihua Chen, Zhong Xue, Xiang Wang, Ning Zhang, Junhua Zheng
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Abstract

Abstract Due to the complicated histopathological characteristics of clear-cell renal-cell carcinoma (ccRCC), non-invasive prognosis before operative treatment is crucial in selecting the appropriate treatment. A total of 126 345 computerized tomography (CT) images from four independent patient cohorts were included for analysis in this study. We propose a V Bottleneck multi-resolution and focus-organ network (VB-MrFo-Net) using a cascade framework for deep learning analysis. The VB-MrFo-Net achieved better performance than VB-Net in tumor segmentation, with a Dice score of 0.87. The nuclear-grade prediction model performed best in the logistic regression classifier, with area under curve values from 0.782 to 0.746. Survival analysis revealed that our prediction model could significantly distinguish patients with high survival risk, with a hazard ratio (HR) of 2.49 [95% confidence interval (CI): 1.13–5.45, P = 0.023] in the General cohort. Excellent performance had also been verified in the Cancer Genome Atlas cohort, the Clinical Proteomic Tumor Analysis Consortium cohort, and the Kidney Tumor Segmentation Challenge cohort, with HRs of 2.77 (95%CI: 1.58–4.84, P = 0.0019), 3.83 (95%CI: 1.22–11.96, P = 0.029), and 2.80 (95%CI: 1.05–7.47, P = 0.025), respectively. In conclusion, we propose a novel VB-MrFo-Net for the renal tumor segmentation and automatic diagnosis of ccRCC. The risk stratification model could accurately distinguish patients with high tumor grade and high survival risk based on non-invasive CT images before surgical treatments, which could provide practical advice for deciding treatment options.

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基于人工智能的透明细胞肾细胞癌无创肿瘤分割、分级分层及预后预测。
由于透明细胞肾细胞癌(clear-cell renal-cell carcinoma, ccRCC)复杂的组织病理特征,术前无创预后对选择合适的治疗方案至关重要。本研究共纳入来自4个独立患者队列的123445张计算机断层扫描(CT)图像进行分析。我们提出了一个使用级联框架进行深度学习分析的V瓶颈多分辨率和焦点器官网络(VB-MrFo-Net)。VB-MrFo-Net在肿瘤分割方面的表现优于VB-Net,其Dice评分为0.87。核级预测模型在logistic回归分类器中表现最好,曲线下面积在0.782 ~ 0.746之间。生存分析显示,我们的预测模型能够显著区分高生存风险患者,在普通队列中,风险比(HR)为2.49[95%置信区间(CI): 1.13-5.45, P = 0.023]。在Cancer Genome Atlas队列、Clinical Proteomic Tumor Analysis Consortium队列和Kidney Tumor Segmentation Challenge队列中,HRs分别为2.77 (95%CI: 1.58-4.84, P = 0.0019)、3.83 (95%CI: 1.22-11.96, P = 0.029)和2.80 (95%CI: 1.05-7.47, P = 0.025)。总之,我们提出了一种新的VB-MrFo-Net用于肾肿瘤的分割和ccRCC的自动诊断。该风险分层模型可根据术前无创CT图像准确区分肿瘤分级高、生存风险高的患者,为治疗方案的选择提供实用建议。
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来源期刊
Annals of Physics
Annals of Physics 物理-物理:综合
CiteScore
5.30
自引率
3.30%
发文量
211
审稿时长
47 days
期刊介绍: Annals of Physics presents original work in all areas of basic theoretic physics research. Ideas are developed and fully explored, and thorough treatment is given to first principles and ultimate applications. Annals of Physics emphasizes clarity and intelligibility in the articles it publishes, thus making them as accessible as possible. Readers familiar with recent developments in the field are provided with sufficient detail and background to follow the arguments and understand their significance. The Editors of the journal cover all fields of theoretical physics. Articles published in the journal are typically longer than 20 pages.
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Editorial Board Relational de Sitter state counting with an SU(3) clock Unification of stochastic matrices and quantum operations for N-level systems Quantum dynamics in real Hilbert space: Algebraic isomorphism and symplectic geometry of the Schrödinger equation Open FLRW spacetime in a time-dependent thermodynamic limit
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