Bioinformatics Analysis of has-miR-181a in some Covid-19 Vaccinated People in Al-Najaf Province

Mohammed Alquraishi, Mohammad Alzeyadi
{"title":"Bioinformatics Analysis of has-miR-181a in some Covid-19 Vaccinated People in Al-Najaf Province","authors":"Mohammed Alquraishi, Mohammad Alzeyadi","doi":"10.21608/eajbsc.2023.313584","DOIUrl":null,"url":null,"abstract":"The angiotensin-converting enzyme 2 (ACE2) is an enzyme of the renin-angiotensin-aldosterone system (RAAS), which catalyzes the conversion of some other angiotensin. ACE2 is widely expressed in different tissues. Many researchers reported many microRNAs involved in ACE2 expression, hsa-mir-181a one of these microRNAs which involved in ACE2 expression. In this study, we develop a comparative method (miR-Explore) to demonstrate that clustering of vaccinated miRNAs hsa-mir-181a of gene ACE2-alters the sensitivity and specificity of the prediction method even when a simple direct alignment of the positional secondary structure is used. The basic idea of the current approach was to generate a predictive visualization of the miRNAs hsa-mir-181a consensus structure for each vaccinated and unvaccinated miRNAs hsa-mir-181a class and use this consensus structure to perform alignment with the query sequence A set of data was taken from pre-miRNA by extracting total RNA and converting it to cDNA, then reading the DNA sequence and following up the in situ secondary structure of these sequences by means of dedicated software programs and websites and comparing them with each other and with sequences available in the microRNA database website","PeriodicalId":52600,"journal":{"name":"Egyptian Academic Journal of Biological Sciences C Physiology and Molecular Biology","volume":"38 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-08-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Egyptian Academic Journal of Biological Sciences C Physiology and Molecular Biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.21608/eajbsc.2023.313584","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

The angiotensin-converting enzyme 2 (ACE2) is an enzyme of the renin-angiotensin-aldosterone system (RAAS), which catalyzes the conversion of some other angiotensin. ACE2 is widely expressed in different tissues. Many researchers reported many microRNAs involved in ACE2 expression, hsa-mir-181a one of these microRNAs which involved in ACE2 expression. In this study, we develop a comparative method (miR-Explore) to demonstrate that clustering of vaccinated miRNAs hsa-mir-181a of gene ACE2-alters the sensitivity and specificity of the prediction method even when a simple direct alignment of the positional secondary structure is used. The basic idea of the current approach was to generate a predictive visualization of the miRNAs hsa-mir-181a consensus structure for each vaccinated and unvaccinated miRNAs hsa-mir-181a class and use this consensus structure to perform alignment with the query sequence A set of data was taken from pre-miRNA by extracting total RNA and converting it to cDNA, then reading the DNA sequence and following up the in situ secondary structure of these sequences by means of dedicated software programs and websites and comparing them with each other and with sequences available in the microRNA database website
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
纳杰夫省部分Covid-19疫苗接种人群中has-miR-181a的生物信息学分析
血管紧张素转化酶2 (ACE2)是肾素-血管紧张素-醛固酮系统(RAAS)中的一种酶,它催化其他一些血管紧张素的转化。ACE2在不同组织中广泛表达。许多研究者报道了许多参与ACE2表达的microrna, hsa-mir-181a是这些参与ACE2表达的microrna之一。在这项研究中,我们开发了一种比较方法(miR-Explore)来证明,即使使用简单的直接定位二级结构,接种疫苗的miRNAs hsa-mir-181a基因ace2的聚类也会改变预测方法的敏感性和特异性。当前方法的基本思想是为每个接种和未接种的miRNAs hsa-mir-181a类生成miRNAs hsa-mir-181a共识结构的预测可视化,并使用该共识结构与查询序列进行比对。通过提取总RNA并将其转化为cDNA,从pre-miRNA中获取一组数据。然后读取DNA序列,通过专门的软件程序和网站跟踪这些序列的原位二级结构,并将它们相互比较,并与microRNA数据库网站上的序列进行比较
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
自引率
0.00%
发文量
66
期刊最新文献
Building Resilient Immunity Against Powassan Virus: The Necessity of A Comprehensive Immunoinformatic Approach and Coordinated T and B Cell Responses Evaluation of Post Covid- 19 Biochemical Alterations in Normal and Chronic Diseased Egyptians: Possible Mechanisms and Role of Vaccines Correlation Between Cytokine Gene CCL3, miRNA146-B and Otitis Media Patients in AL-Najaf Governorate, Iraq Evaluation of Some Auto-Antibody Levels in Patients with Autoimmune Thyroiditis Quantitative Assessment of Serum Specific IgE in the Diagnosis of Echinococcus granulosus
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1