{"title":"Non-parametric calibration of multiple related radiocarbon determinations and their calendar age summarisation","authors":"Timothy J. Heaton","doi":"10.1111/rssc.12599","DOIUrl":null,"url":null,"abstract":"<p>Due to fluctuations in past radiocarbon (<math>\n <semantics>\n <mrow>\n <msup>\n <mrow></mrow>\n <mrow>\n <mn>14</mn>\n </mrow>\n </msup>\n </mrow>\n <annotation>$$ {}^{14} $$</annotation>\n </semantics></math>C) levels, calibration is required to convert <math>\n <semantics>\n <mrow>\n <msup>\n <mrow></mrow>\n <mrow>\n <mn>14</mn>\n </mrow>\n </msup>\n </mrow>\n <annotation>$$ {}^{14} $$</annotation>\n </semantics></math>C determinations <math>\n <semantics>\n <mrow>\n <msub>\n <mrow>\n <mi>X</mi>\n </mrow>\n <mrow>\n <mi>i</mi>\n </mrow>\n </msub>\n </mrow>\n <annotation>$$ {X}_i $$</annotation>\n </semantics></math> into calendar ages <math>\n <semantics>\n <mrow>\n <msub>\n <mrow>\n <mi>θ</mi>\n </mrow>\n <mrow>\n <mi>i</mi>\n </mrow>\n </msub>\n </mrow>\n <annotation>$$ {\\theta}_i $$</annotation>\n </semantics></math>. In many studies, we wish to calibrate a set of related samples taken from the same site or context, which have calendar ages drawn from the same shared, but unknown, density <math>\n <semantics>\n <mrow>\n <mi>f</mi>\n <mo>(</mo>\n <mi>θ</mi>\n <mo>)</mo>\n </mrow>\n <annotation>$$ f\\left(\\theta \\right) $$</annotation>\n </semantics></math>. Calibration of <math>\n <semantics>\n <mrow>\n <msub>\n <mrow>\n <mi>X</mi>\n </mrow>\n <mrow>\n <mn>1</mn>\n </mrow>\n </msub>\n <mo>,</mo>\n <mi>…</mi>\n <mo>,</mo>\n <msub>\n <mrow>\n <mi>X</mi>\n </mrow>\n <mrow>\n <mi>n</mi>\n </mrow>\n </msub>\n </mrow>\n <annotation>$$ {X}_1,\\dots, {X}_n $$</annotation>\n </semantics></math> can be improved significantly by incorporating the knowledge that the samples are related. Furthermore, summary estimates of the underlying shared <math>\n <semantics>\n <mrow>\n <mi>f</mi>\n <mo>(</mo>\n <mi>θ</mi>\n <mo>)</mo>\n </mrow>\n <annotation>$$ f\\left(\\theta \\right) $$</annotation>\n </semantics></math> can provide valuable information on changes in population size/activity over time. Most current approaches require a parametric specification for <math>\n <semantics>\n <mrow>\n <mi>f</mi>\n <mo>(</mo>\n <mi>θ</mi>\n <mo>)</mo>\n </mrow>\n <annotation>$$ f\\left(\\theta \\right) $$</annotation>\n </semantics></math> which is often not appropriate. We develop a rigorous non-parametric Bayesian approach using a Dirichlet process mixture model, with slice sampling to address the multi-modality typical within <math>\n <semantics>\n <mrow>\n <msup>\n <mrow></mrow>\n <mrow>\n <mn>14</mn>\n </mrow>\n </msup>\n </mrow>\n <annotation>$$ {}^{14} $$</annotation>\n </semantics></math>C calibration. Our approach simultaneously calibrates the set of <math>\n <semantics>\n <mrow>\n <msup>\n <mrow></mrow>\n <mrow>\n <mn>14</mn>\n </mrow>\n </msup>\n </mrow>\n <annotation>$$ {}^{14} $$</annotation>\n </semantics></math>C determinations and provides a predictive estimate for the underlying calendar age of a future sample. We show, in a simulation study, the improvement in calendar age estimation when jointly calibrating related samples using our approach, compared with calibration of each <math>\n <semantics>\n <mrow>\n <msup>\n <mrow></mrow>\n <mrow>\n <mn>14</mn>\n </mrow>\n </msup>\n </mrow>\n <annotation>$$ {}^{14} $$</annotation>\n </semantics></math>C determination independently. We also illustrate the use of the predictive calendar age estimate to provide insight on activity levels over time using three real-life case studies.</p>","PeriodicalId":49981,"journal":{"name":"Journal of the Royal Statistical Society Series C-Applied Statistics","volume":"71 5","pages":"1918-1956"},"PeriodicalIF":1.0000,"publicationDate":"2022-10-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://rss.onlinelibrary.wiley.com/doi/epdf/10.1111/rssc.12599","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of the Royal Statistical Society Series C-Applied Statistics","FirstCategoryId":"100","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/rssc.12599","RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"STATISTICS & PROBABILITY","Score":null,"Total":0}
引用次数: 1
Abstract
Due to fluctuations in past radiocarbon (C) levels, calibration is required to convert C determinations into calendar ages . In many studies, we wish to calibrate a set of related samples taken from the same site or context, which have calendar ages drawn from the same shared, but unknown, density . Calibration of can be improved significantly by incorporating the knowledge that the samples are related. Furthermore, summary estimates of the underlying shared can provide valuable information on changes in population size/activity over time. Most current approaches require a parametric specification for which is often not appropriate. We develop a rigorous non-parametric Bayesian approach using a Dirichlet process mixture model, with slice sampling to address the multi-modality typical within C calibration. Our approach simultaneously calibrates the set of C determinations and provides a predictive estimate for the underlying calendar age of a future sample. We show, in a simulation study, the improvement in calendar age estimation when jointly calibrating related samples using our approach, compared with calibration of each C determination independently. We also illustrate the use of the predictive calendar age estimate to provide insight on activity levels over time using three real-life case studies.
期刊介绍:
The Journal of the Royal Statistical Society, Series C (Applied Statistics) is a journal of international repute for statisticians both inside and outside the academic world. The journal is concerned with papers which deal with novel solutions to real life statistical problems by adapting or developing methodology, or by demonstrating the proper application of new or existing statistical methods to them. At their heart therefore the papers in the journal are motivated by examples and statistical data of all kinds. The subject-matter covers the whole range of inter-disciplinary fields, e.g. applications in agriculture, genetics, industry, medicine and the physical sciences, and papers on design issues (e.g. in relation to experiments, surveys or observational studies).
A deep understanding of statistical methodology is not necessary to appreciate the content. Although papers describing developments in statistical computing driven by practical examples are within its scope, the journal is not concerned with simply numerical illustrations or simulation studies. The emphasis of Series C is on case-studies of statistical analyses in practice.