{"title":"Variational Bayesian analysis of nonuniformly sampled NMR data","authors":"Bradley Worley","doi":"10.1002/cmr.a.21428","DOIUrl":null,"url":null,"abstract":"<p>Nonuniform sampling (NUS) offers NMR spectroscopists a means of accelerating data collection and increasing spectral quality in multidimensional (<i>n</i>D) experiments. The data from NUS experiments are incomplete by design, and must be reconstructed prior to use. While most existing reconstruction techniques compute point estimates of the true signal, Bayesian statistics offers a means of estimating <i>posterior distributions</i> over the signal, which enable more rigorous quantitation and uncertainty estimation. In this article, we describe the <i>variational</i> approach to approximating Bayesian posterior distributions, and illustrate how it can be applied to extend existing results from Bayesian spectrum analysis and compressed sensing. The new NUS reconstruction algorithms resulting from variational Bayes are computationally efficient, and offer new insights into the concepts of spectral sparsity and optimal sampling in NMR experiments.</p>","PeriodicalId":55216,"journal":{"name":"Concepts in Magnetic Resonance Part A","volume":"46A 2","pages":""},"PeriodicalIF":0.4000,"publicationDate":"2018-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/cmr.a.21428","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Concepts in Magnetic Resonance Part A","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/cmr.a.21428","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Nonuniform sampling (NUS) offers NMR spectroscopists a means of accelerating data collection and increasing spectral quality in multidimensional (nD) experiments. The data from NUS experiments are incomplete by design, and must be reconstructed prior to use. While most existing reconstruction techniques compute point estimates of the true signal, Bayesian statistics offers a means of estimating posterior distributions over the signal, which enable more rigorous quantitation and uncertainty estimation. In this article, we describe the variational approach to approximating Bayesian posterior distributions, and illustrate how it can be applied to extend existing results from Bayesian spectrum analysis and compressed sensing. The new NUS reconstruction algorithms resulting from variational Bayes are computationally efficient, and offer new insights into the concepts of spectral sparsity and optimal sampling in NMR experiments.
期刊介绍:
Concepts in Magnetic Resonance Part A brings together clinicians, chemists, and physicists involved in the application of magnetic resonance techniques. The journal welcomes contributions predominantly from the fields of magnetic resonance imaging (MRI), nuclear magnetic resonance (NMR), and electron paramagnetic resonance (EPR), but also encourages submissions relating to less common magnetic resonance imaging and analytical methods.
Contributors come from academic, governmental, and clinical communities, to disseminate the latest important experimental results from medical, non-medical, and analytical magnetic resonance methods, as well as related computational and theoretical advances.
Subject areas include (but are by no means limited to):
-Fundamental advances in the understanding of magnetic resonance
-Experimental results from magnetic resonance imaging (including MRI and its specialized applications)
-Experimental results from magnetic resonance spectroscopy (including NMR, EPR, and their specialized applications)
-Computational and theoretical support and prediction for experimental results
-Focused reviews providing commentary and discussion on recent results and developments in topical areas of investigation
-Reviews of magnetic resonance approaches with a tutorial or educational approach