Genetic diversity and population structure of Lupinus albus (L.) from the Amhara region of Ethiopia using seed storage protein markers

Q4 Agricultural and Biological Sciences Journal of Agricultural Sciences, Belgrade Pub Date : 2022-01-01 DOI:10.2298/jas2201001k
S. Kelemu, E. Shiferaw, F. Hailu
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引用次数: 1

Abstract

The genetic diversity in 48 lupin (Lupinus albus (L.) accessions collected from the Amhara region, Ethiopia, was assessed using seed storage protein markers (SDS-PAGE). A total of 30 different protein bands with sizes ranging from 11 to 100 kDa were detected. The average number of protein bands, the percentage of polymorphism, and gene diversity in the accessions were 16.96, 20.35, and 0.072, respectively. Genetic diversity estimates showed that West Gojam and Bahir Dar areas could be the most important sources for lupin genetic resources. The pair-wise comparison of genetic distances (GDs) among the accessions ranged from 0.011 to 0.378. The most distantly related accessions were accession 6, collected from the West Gojam zone, and accession 28 from the Bahir Dar area. Principal coordinate analysis (PCoA) showed the absence of a distinct group, and most of the accessions were intermixed. Population structure analysis revealed that the 48 lupin accessions could be assigned to three clusters. Similar to PCoA, no defined grouping based on geographic origin was observed. Accessions from different geographic origins being grouped together could be attributed to a common origin for the various accessions in the different zones, or it could be the result of seed-mediated gene flow among different lupin growing areas of the country.
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利用种子贮藏蛋白标记分析埃塞俄比亚阿姆哈拉地区白Lupinus albus (L.)的遗传多样性和群体结构
采用种子储存蛋白标记(SDS-PAGE)技术对采自埃塞俄比亚阿姆哈拉地区的48份卢平(Lupinus albus (L.))材料进行了遗传多样性分析。共检测到30条大小在11 ~ 100 kDa之间的不同蛋白条带。蛋白质条带数、多态性百分比和基因多样性的平均值分别为16.96、20.35和0.072。遗传多样性估计表明,西Gojam和Bahir Dar地区可能是lupin遗传资源的最重要来源。遗传距离(GDs)的两两比较范围为0.011 ~ 0.378。亲缘关系最远的加入是来自西戈贾姆地区的第6号加入和来自巴希尔达尔地区的第28号加入。主坐标分析(PCoA)结果显示,各品种间没有明显的类群,多数品种为混合品种。种群结构分析表明,这48种林分可划分为3个聚类。与PCoA类似,没有观察到基于地理来源的明确分组。来自不同地理来源的材料被归类在一起可能归因于不同区域的各种材料的共同起源,或者可能是种子介导的基因在该国不同卢平种植区之间流动的结果。
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来源期刊
Journal of Agricultural Sciences, Belgrade
Journal of Agricultural Sciences, Belgrade Agricultural and Biological Sciences-Animal Science and Zoology
CiteScore
0.70
自引率
0.00%
发文量
14
审稿时长
12 weeks
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