Evaluation of the Efficacy of Herbal Antidotes of Viper Snakes through In-silico Docking Analysis of their Bioactive Components Targeting Phospholipase A2

R. Adithya, S. Kanimozhi
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Abstract

Introduction: Snake bite is common in Rural areas. Many toxic snakes produce neurotoxic, Myotoxic, and hemotoxic effects. Snake venom is rich in metalloproteinases and Phospholipases. PhospholipaseA2 accounts for most of the toxic effects of Viper snakes. Many herbal antidotes have been in practice in the Siddha system which lacks scientific evidence. Aim: This study aims to rule out the Binding pose and affinity of bioactive components derived from certain herbs with the target by forming hydrogen bonds so that the function of Phospholipases A2 with PDB – 2QOG would be hindered. Materials and Methods: From the listed plants 6 bioactive components were selected and In-Siico docking analysis was done with the target2QOG. Andrographolide (49 ASP, 52 TYR), Aristolochic acid(49 ASP, 52 TYR), Genistein(49 ASP, 52 TYR), and Nimbolide (49 ASP, 52 TYR) revealed a maximum of 2 interactions (50%) with the core active amino acid residues present on the target2QOG. Piperic acid (48 HIS) and Linoleic acid(48 HIS) reveal 1 interaction with the core active amino acid residues present on the target 2QOG. Conclusion: Based on the results it was concluded that the bio-active compounds Andrographolide, Aristolochic acid, and Genistein present in the herbal ingredients possess significant binding against the target enzyme phospholipases A2.
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以磷脂酶A2为靶点的蛇毒解毒中药的芯片对接分析
蛇咬伤在农村地区很常见。许多毒蛇产生神经毒性、肌毒性和血液毒性作用。蛇毒含有丰富的金属蛋白酶和磷脂酶。磷脂酶a2是蝰蛇中毒的主要原因。许多草药解毒剂已经在实践中,在悉达系统缺乏科学证据。目的:本研究旨在通过形成氢键来排除某些草药衍生的生物活性成分与靶标的结合姿态和亲和力,从而阻碍磷脂酶A2与PDB - 2QOG的功能。材料与方法:从所列植物中筛选出6种活性成分,与target2QOG进行In-Siico对接分析。Andrographolide (49 ASP, 52 TYR)、马兜铃酸(49 ASP, 52 TYR)、染料木黄酮(49 ASP, 52 TYR)和Nimbolide (49 ASP, 52 TYR)与target2QOG上的核心活性氨基酸残基存在最多2个相互作用(50%)。胡椒酸(48 HIS)和亚油酸(48 HIS)与目标2QOG上的核心活性氨基酸残基有1个相互作用。结论:中药成分中含有穿心莲内酯、马兜铃酸、染料木素等生物活性物质,对靶酶磷脂酶A2具有明显的结合作用。
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