Genetic evaluation of farmer's rice varieties for physiological and yield attributing responses exploiting principal component analysis

N. Khoth, S. Singh, R. Ramakrishnan, G. K. Koutu, Radheshyam Sharma, Ashish Kumar, N. Pathak, P. Kumawat, Akarsha Aj, Abhiraj, S. Dwivedi
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Abstract

An experiment was conducted on 30 farmer's rice varieties collected from different districts of Madhya Pradesh to identify the genetic components contributing to phenophasic development, physiological, yield attributes and biochemical traits. Principal component analysis was performed to rank the farmer's varieties based on PC scores acquired as per the trait studied. Out of twenty-six traits, only five principal components (PCs) exhibited more than 1.00 Eigen value and showed 85.80% of total cumulative variability. The PC1 showed 58.55%, while PC 2, PC 3, PC 4 and PC 5, exhibited 10.29%, 7.03%, 5.23% and 4.69% variability, respectively. The PC 1 reported the highest variability, which was associated with physiological and yield related traits. The PC 2 was dominated by biochemical traits, while PC3 was mostly dominated for yield traits. The PC 4 was dominated by physiological traits, and PC5 for phenological and yield-related traits. Farmer's variety Pandu was superior for Chlorophyll content index (38.27), total dry matter production (38.15 g plant-1), Leaf area index (4.09), Leaf area duration (17982 cm2 days) and crop growth rate (0.00282 g m-2 day-1). PCA revealed that genotype Pandu (7.224) acquired highest PC score followed by Raibua (5.364), Bahurupi (5.103) and Chinnor 1 (4.750) respectively. Farmers varieties Pandu, Chhindikapoor, Bahurupi, Sitha Chandan, Chinnor 2, Chinnor 1 and ChhotaSathiya were contributed their presence in maximum PCs of this investigation. The identified lines will be utilized in the rice breeding programme to develop improved rice varieties for high yield and maximum physiological efficiency.
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利用主成分分析对水稻品种生理和产量性状的遗传评价
以中央邦30个水稻品种为研究对象,研究了影响水稻物候发育、生理性状、产量性状和生化性状的遗传成分。主成分分析根据所研究性状的PC得分对农民的品种进行排名。在26个性状中,只有5个主成分(PCs)的特征值大于1.00,占总累积变异率的85.80%。PC1变异率为58.55%,pc2、pc3、pc4和pc5变异率分别为10.29%、7.03%、5.23%和4.69%。pc1的变异率最高,这与生理和产量相关性状有关。pc2以生化性状为主,PC3以产量性状为主。pc4以生理性状为主,PC5以物候性状和产量性状为主。农民品种Pandu在叶绿素含量指数(38.27)、总干物质产量(38.15 g -株-1)、叶面积指数(4.09)、叶面积持续时间(17982 cm2 -1)和作物生长率(0.00282 g - m-2 day-1)方面均优于农民品种Pandu。基因型Pandu (7.224) PC得分最高,其次是Raibua(5.364)、Bahurupi(5.103)和Chinnor 1(4.750)。农民品种Pandu、Chhindikapoor、Bahurupi、Sitha Chandan、Chinnor 2、Chinnor 1和ChhotaSathiya在本调查中贡献了最大的pc。鉴定的品系将用于水稻育种计划,以开发高产和最高生理效率的改良水稻品种。
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