TFCNs: A CNN-Transformer Hybrid Network for Medical Image Segmentation

Zihan Li, Dihan Li, Cangbai Xu, Wei-Chien Wang, Qingqi Hong, Qingde Li, Jie Tian
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引用次数: 16

Abstract

Medical image segmentation is one of the most fundamental tasks concerning medical information analysis. Various solutions have been proposed so far, including many deep learning-based techniques, such as U-Net, FC-DenseNet, etc. However, high-precision medical image segmentation remains a highly challenging task due to the existence of inherent magnification and distortion in medical images as well as the presence of lesions with similar density to normal tissues. In this paper, we propose TFCNs (Transformers for Fully Convolutional denseNets) to tackle the problem by introducing ResLinear-Transformer (RL-Transformer) and Convolutional Linear Attention Block (CLAB) to FC-DenseNet. TFCNs is not only able to utilize more latent information from the CT images for feature extraction, but also can capture and disseminate semantic features and filter non-semantic features more effectively through the CLAB module. Our experimental results show that TFCNs can achieve state-of-the-art performance with dice scores of 83.72% on the Synapse dataset. In addition, we evaluate the robustness of TFCNs for lesion area effects on the COVID-19 public datasets. The Python code will be made publicly available on https://github.com/HUANGLIZI/TFCNs. © 2022, The Author(s), under exclusive license to Springer Nature Switzerland AG.
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TFCNs:用于医学图像分割的CNN-Transformer混合网络
医学图像分割是医学信息分析中最基本的任务之一。到目前为止,已经提出了各种解决方案,包括许多基于深度学习的技术,如U-Net, FC-DenseNet等。然而,由于医学图像存在固有的放大和畸变,以及存在与正常组织密度相似的病变,高精度医学图像分割仍然是一项极具挑战性的任务。在本文中,我们提出了TFCNs (transformer for Fully Convolutional densenet),通过在FC-DenseNet中引入ResLinear-Transformer (RL-Transformer)和Convolutional Linear Attention Block (CLAB)来解决这个问题。TFCNs不仅可以利用CT图像中更多的潜在信息进行特征提取,还可以通过CLAB模块更有效地捕获和传播语义特征,过滤非语义特征。我们的实验结果表明,TFCNs在Synapse数据集上的骰子得分为83.72%,可以达到最先进的性能。此外,我们评估了tfns在COVID-19公共数据集上对病变区域效应的鲁棒性。Python代码将在https://github.com/HUANGLIZI/TFCNs上公开提供。©2022,作者获得施普林格自然瑞士股份有限公司的独家授权。
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