Brdicka curve — A new source of biomarkers

Lenka Vyslouzilova, V. Adam, Andrea Szabóová, O. Štěpánková, R. Kizek, Jiří Anýž
{"title":"Brdicka curve — A new source of biomarkers","authors":"Lenka Vyslouzilova, V. Adam, Andrea Szabóová, O. Štěpánková, R. Kizek, Jiří Anýž","doi":"10.1109/BIBMW.2011.6112374","DOIUrl":null,"url":null,"abstract":"This paper is devoted to analysis of voltammograms resulting from Brdicka reaction - the graphs that are currently used for determination of content of metallothioneins (MT) in tissue samples most often. We describe our search for typical patterns in the considered curves that would make it possible to distinguish among voltammograms produced by samples taken from different body parts. We suggest a rather compact representation of information contained in the considered graphs that is based on Haar's Simple Wavelet transformation. The resulting representation is successfully tested for classification of real data obtained from 8 rats and their 9 body parts. The preliminary experiments confirm that the suggested derived attributes of Brdicka curves seem to be good candidates for becoming numerical biomarkers exhibiting an important advantage: the process leading to their calculation can be fully automated.","PeriodicalId":6345,"journal":{"name":"2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW)","volume":"11 1","pages":"193-198"},"PeriodicalIF":0.0000,"publicationDate":"2011-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/BIBMW.2011.6112374","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 1

Abstract

This paper is devoted to analysis of voltammograms resulting from Brdicka reaction - the graphs that are currently used for determination of content of metallothioneins (MT) in tissue samples most often. We describe our search for typical patterns in the considered curves that would make it possible to distinguish among voltammograms produced by samples taken from different body parts. We suggest a rather compact representation of information contained in the considered graphs that is based on Haar's Simple Wavelet transformation. The resulting representation is successfully tested for classification of real data obtained from 8 rats and their 9 body parts. The preliminary experiments confirm that the suggested derived attributes of Brdicka curves seem to be good candidates for becoming numerical biomarkers exhibiting an important advantage: the process leading to their calculation can be fully automated.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Brdicka曲线——生物标记物的新来源
本文致力于分析由Brdicka反应产生的伏安图-目前最常用于组织样品中金属硫蛋白(MT)含量的测定。我们描述了我们在考虑的曲线中寻找典型模式,这将有可能区分来自不同身体部位的样品产生的伏安图。我们建议基于Haar简单小波变换的考虑图中包含的信息的一个相当紧凑的表示。我们成功地对8只大鼠及其9个身体部位的真实数据进行了分类测试。初步实验证实,Brdicka曲线的衍生属性似乎是成为数字生物标志物的良好候选者,表现出一个重要的优势:导致其计算的过程可以完全自动化。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Evolution of protein architectures inferred from phylogenomic analysis of CATH Hierarchical modeling of alternative exon usage associations with survival 3D point cloud sensors for low-cost medical in-situ visualization Bayesian Classifiers for Chemical Toxicity Prediction Normal mode analysis of protein structure dynamics based on residue contact energy
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1