Study of Glabranin as an Inhibitor Against Prostate Cancer: Molecular Docking, Molecular Dynamics Simulation, MM-PBSA Calculation and QSAR Prediction.

IF 1.5 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Indian Journal of Clinical Biochemistry Pub Date : 2024-07-01 Epub Date: 2023-04-01 DOI:10.1007/s12291-023-01134-3
Rene Barbie Browne, Nabajyoti Goswami, Probodh Borah, Jayanti Datta Roy
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Abstract

Prostate cancer is the World's second most frequent malignancy, with the fifth-highest male mortality rate. In advanced prostate cancer patients, point mutations such as T877A and W741L are prevalent, imparting treatment resistance and hence promoting cancer development. The emergence of drug resistance in prostate cancer necessitates the development of suitable ligands to allow for stronger interactions with the receptors, which can inhibit cancer progression. The present study focuses on flavonoids produced by plants, which may act as inhibitors of point mutations like T877A and W741L in prostate cancer. This research was conducted using an in-silico method where the compound Glabranin and its derivatives were virtually screened to identify potential drugs for combating such point mutations. Thirty-five Molecular Dockings were performed to find the ligand-receptor complexes with the lowest binding energy. Moreover, employing a variety of tools, ligands were evaluated for drug-likeness and toxicity, indicating a promising drug candidate. Based on the results of Molecular Docking, Drug-likeness, and ADMET testing, eight structures were subjected to a 100 ns Molecular Dynamics simulation. A QSAR analysis was also performed based on the simulation findings. In this study, it was revealed that GlaMod2 phytocompound was effective against T877A and W741L mutations in prostate cancer. It was observed that the phytocompound was stable and had potential properties for the development of a novel drug to combat prostate cancer and drug resistance This phytocompound may therefore be effective in the development of prostate cancer inhibitors for patients with mutant androgen receptors.

Graphical abstract:

Supplementary information: The online version contains supplementary material available at 10.1007/s12291-023-01134-3.

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Glabranin作为前列腺癌抑制剂的研究:分子对接、分子动力学模拟、MM-PBSA计算和QSAR预测。
前列腺癌是世界上第二常见的恶性肿瘤,男性死亡率排名第五。在晚期前列腺癌患者中,T877A和W741L等点突变普遍存在,导致治疗耐药,从而促进癌症发展。前列腺癌耐药的出现需要合适的配体的发展,以允许与受体更强的相互作用,这可以抑制癌症的进展。目前的研究重点是植物产生的类黄酮,它们可能是前列腺癌中T877A和W741L等点突变的抑制剂。本研究采用计算机方法进行,其中化合物Glabranin及其衍生物进行虚拟筛选,以确定对抗此类点突变的潜在药物。通过35次分子对接,找到了结合能最低的配体-受体复合物。此外,采用多种工具,评估配体的药物相似性和毒性,表明有希望的候选药物。基于分子对接、药物相似性和ADMET测试结果,对8种结构进行了100 ns的分子动力学模拟。基于模拟结果,还进行了QSAR分析。本研究发现,GlaMod2植物化合物对前列腺癌T877A和W741L突变具有一定的抑制作用。结果表明,该植物化合物稳定,具有开发抗前列腺癌和耐药新药的潜力,可用于雄激素受体突变患者的前列腺癌抑制剂的开发。图片摘要:补充资料:在线版本包含补充资料,网址为10.1007/s12291-023-01134-3。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Indian Journal of Clinical Biochemistry
Indian Journal of Clinical Biochemistry BIOCHEMISTRY & MOLECULAR BIOLOGY-
CiteScore
4.50
自引率
4.80%
发文量
74
期刊介绍: The primary mission of the journal is to promote improvement in the health and well-being of community through the development and practice of clinical biochemistry and dissemination of knowledge and recent advances in this discipline among professionals, diagnostics industry, government and non-government organizations. Indian Journal of Clinical Biochemistry (IJCB) publishes peer reviewed articles that contribute to the existing knowledge in all fields of Clinical biochemistry, either experimental or theoretical, particularly deal with the applications of biochemistry, molecular biology, genetics, biotechnology, and immunology to the diagnosis, treatment, monitoring and prevention of human diseases. The articles published also include those covering the analytical and molecular diagnostic techniques, instrumentation, data processing, quality assurance and accreditation aspects of the clinical investigations in which chemistry has played a major role, or laboratory animal studies with biochemical and clinical relevance.
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