Software based approaches for drug designing and development: A systematic review on commonly used software and its applications

Prasad G. Jamkhande , Mahavir H. Ghante , Balaji R. Ajgunde
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引用次数: 29

Abstract

Drug discovery include drug designing and development, is a multifarious and expensive endeavor, where least number of drugs that pass the clinical trials makes it to market. Software based drug discovery and development methods have major role in the development of bioactive compounds for over last three decades. Novel software based methods such as molecular modeling, structure-based drug design, structure-based virtual screening, ligand interaction and molecular dynamics are considered to be powerful tool for investigation of pharmacokinetic and pharmacodynamic properties of drug, and structural activity relationship between ligand and its target. Computational approaches such as docking confer interaction of small molecules with structural macromolecules and thereby hit identification and lead optimization. These methods are faster, and accurately provide valuable insights of experimental findings and mechanisms of action. In addition, appropriate implementation of these techniques could lead to a reduction in cost of drug designing and development. Currently in biomedicine sciences these software are exhibiting imperative role in the different phases of drug discovery. The review discusses working principle and successful applications of most commonly used software for drug designing and development.

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基于软件的药物设计和开发方法:对常用软件及其应用的系统回顾
药物发现包括药物设计和开发,是一项繁杂而昂贵的努力,其中通过临床试验的药物数量最少,从而进入市场。在过去的三十年中,基于软件的药物发现和开发方法在生物活性化合物的开发中发挥了重要作用。分子建模、基于结构的药物设计、基于结构的虚拟筛选、配体相互作用和分子动力学等基于软件的新方法被认为是研究药物的药代动力学和药效学性质以及配体与靶标之间结构活性关系的有力工具。对接等计算方法赋予小分子与结构大分子的相互作用,从而实现命中识别和导联优化。这些方法更快,并准确地提供有价值的见解的实验结果和作用机制。此外,适当实施这些技术可以降低药物设计和开发的成本。目前在生物医学科学中,这些软件在药物发现的不同阶段发挥着不可或缺的作用。综述了药物设计与开发中常用软件的工作原理和成功应用。
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