Design Automation for Digital Microfluidic Biochips

Tsung-Yi Ho
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引用次数: 7

Abstract

Microfluidic biochips are replacing the conventional biochemical analyzers, and are able to integrate onchip all the basic functions for biochemical analysis. The “digital” microfluidic biochips (DMFBs) are manipulating liquids not as a continuous flow, but as discrete droplets on a two-dimensional array of electrodes. Basic microfluidic operations, such as mixing and dilution, are performed on the array, by routing the corresponding droplets on a series of electrodes. The challenges facing biochips are similar to those faced by microelectronics some decades ago. To meet the challenges of increasing design complexity, computer-aided-design (CAD) tools are being developed for DMFBs. This paper provides an overview of DMFBs and describes emerging CAD tools for the automated synthesis and optimization of DMFB designs, from fluidic-level synthesis and chip-level design to testing. Design automations are expected to alleviate the burden of manual optimization of bioassays, time-consuming chip designs, and costly testing and maintenance procedures. With the assistance of CAD tools, users can concentrate on the development and abstraction of nanoscale bioassays while leaving chip optimization and implementation details to CAD tools.
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数字微流控生物芯片的设计自动化
微流控生物芯片正在取代传统的生化分析仪,并能在芯片上集成生化分析的所有基本功能。“数字”微流控生物芯片(dmfb)控制的液体不是连续流动的,而是二维电极阵列上的离散液滴。基本的微流体操作,如混合和稀释,是在阵列上进行的,通过在一系列电极上排列相应的液滴。生物芯片面临的挑战与几十年前微电子所面临的挑战类似。为了应对日益增加的设计复杂性的挑战,计算机辅助设计(CAD)工具正在为dmfb开发。本文概述了DMFB,并描述了用于DMFB设计的自动合成和优化的新兴CAD工具,从流体级合成和芯片级设计到测试。设计自动化有望减轻人工优化生物测定的负担,耗时的芯片设计,以及昂贵的测试和维护程序。在CAD工具的帮助下,用户可以专注于纳米级生物测定的开发和抽象,而将芯片优化和实施细节留给CAD工具。
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IPSJ Transactions on System LSI Design Methodology
IPSJ Transactions on System LSI Design Methodology Engineering-Electrical and Electronic Engineering
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