Computational Prediction of N6-methyladenosine (m6A) RNA Methylation in SARS-CoV-2 Viral Transcripts

Qingru Xu, Xiangyu Wu, Jia Meng
{"title":"Computational Prediction of N6-methyladenosine (m6A) RNA Methylation in SARS-CoV-2 Viral Transcripts","authors":"Qingru Xu, Xiangyu Wu, Jia Meng","doi":"10.1145/3469678.3469689","DOIUrl":null,"url":null,"abstract":"SARS-CoV-2 caused atypical pneumonia (COVID-19) is an ongoing pandemic that seriously threat the global public health. Many people die from this disease with severe symptoms. The most prevalent m6A RNA modification may be involved in by assisting the virus escaping from the host cell immune system attack. We provided here the first computational prediction study of RNA methylation sites in SARS-CoV-2. Based on virus sequence information, we predict the potential virus m6A sites and hope to make anyhow contributions to this unprecedented situation. As a result, we found 27 most frequent m6A sequences (41 bp) in SARS-CoV-2, and two of them are quite near to the spike protein stop codon position.","PeriodicalId":22513,"journal":{"name":"The Fifth International Conference on Biological Information and Biomedical Engineering","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2021-07-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"The Fifth International Conference on Biological Information and Biomedical Engineering","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1145/3469678.3469689","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

SARS-CoV-2 caused atypical pneumonia (COVID-19) is an ongoing pandemic that seriously threat the global public health. Many people die from this disease with severe symptoms. The most prevalent m6A RNA modification may be involved in by assisting the virus escaping from the host cell immune system attack. We provided here the first computational prediction study of RNA methylation sites in SARS-CoV-2. Based on virus sequence information, we predict the potential virus m6A sites and hope to make anyhow contributions to this unprecedented situation. As a result, we found 27 most frequent m6A sequences (41 bp) in SARS-CoV-2, and two of them are quite near to the spike protein stop codon position.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
SARS-CoV-2病毒转录物中n6 -甲基腺苷(m6A) RNA甲基化的计算预测
SARS-CoV-2引起的非典型肺炎(COVID-19)是一种严重威胁全球公共卫生的持续大流行。许多人死于这种疾病,症状严重。最常见的m6A RNA修饰可能是通过帮助病毒逃避宿主细胞免疫系统的攻击。我们在这里提供了SARS-CoV-2中RNA甲基化位点的首次计算预测研究。根据病毒序列信息,预测潜在的病毒m6A位点,希望对这一前所未有的局面有所贡献。结果,我们在SARS-CoV-2中发现了27个最常见的m6A序列(41 bp),其中两个序列非常接近刺突蛋白停止密码子位置。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Localizing Epileptic Focus of Patients with Epilepsy Using Post-Ictal Scalp EEG Effects of Grazing Intensity on Soil Bacterial Community Structure of Stipa grandis Grasslands in Inner Mongolia, China L1/2 Regularization-Based Deep Incremental Non-negative Matrix Factorization for Tumor Recognition Computation Prediction of the Therapeutic Effect of Metal Stent Implantation for Coronary Bifurcation Identifying Enhancers and Their Strength Based on PCWM Feature by A Two-Layer Predictor
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1