VOLUME ESTIMATION FROM SINGLE IMAGES: AN APPLICATION TO PANCREATIC ISLETS

IF 0.8 4区 计算机科学 Q4 IMAGING SCIENCE & PHOTOGRAPHIC TECHNOLOGY Image Analysis & Stereology Pub Date : 2018-12-06 DOI:10.5566/IAS.1869
J. Dvořák, J. Švihlík, J. Kybic, B. Radochová, J. Janáček, J. Kukal, Jiri Borovec, D. Habart
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引用次数: 2

Abstract

The present paper deals with the problem of volume estimation of individual objects from a single 2D view. Our main application is volume estimation of pancreatic (Langerhans) islets and the single 2D view constraint comes from the time and equipment limitations of the standard clinical procedure.Two main approaches are followed in this paper. First, two regression-based methods are proposed, using a set of simple shape descriptors of the segmented image of the islet. Second, two example-based methods are proposed, based on a database of islets with known volume. For training and evaluation, islet volumes were determined by OPT microscopy and a semi-automatical stereological volume estimation using the so-called Fakir probes.The performance of the single image volume estimation methods is studied on a set of 99 islets from human donors. Further experiments were also performed on a stone dataset and on synthetic 3D shapes, generated using a flexible stochastic particle model. The proposed methods are fast and the experimental results show that in most situations the proposed methods perform significantly better than the methods currently used in clinical practice, which are based on simple spherical or ellipsoidal models.
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单幅图像的体积估计:胰岛的应用
本文讨论了从单个二维视图中对单个物体进行体积估计的问题。我们的主要应用是胰腺(朗格汉斯)胰岛的体积估计,单一二维视图的限制来自于标准临床程序的时间和设备限制。本文主要采用两种方法。首先,提出了两种基于回归的方法,使用一组简单的岛屿分割图像形状描述符。其次,基于已知体积的胰岛数据库,提出了两种基于实例的方法。为了训练和评估,胰岛体积通过OPT显微镜和使用所谓的Fakir探针的半自动立体体积估计来确定。在99个人体供体胰岛上研究了单幅图像体积估计方法的性能。进一步的实验还在石头数据集和合成3D形状上进行,这些形状是使用灵活的随机粒子模型生成的。实验结果表明,在大多数情况下,所提出的方法明显优于目前临床实践中使用的基于简单球形或椭球体模型的方法。
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来源期刊
Image Analysis & Stereology
Image Analysis & Stereology MATERIALS SCIENCE, MULTIDISCIPLINARY-MATHEMATICS, APPLIED
CiteScore
2.00
自引率
0.00%
发文量
7
审稿时长
>12 weeks
期刊介绍: Image Analysis and Stereology is the official journal of the International Society for Stereology & Image Analysis. It promotes the exchange of scientific, technical, organizational and other information on the quantitative analysis of data having a geometrical structure, including stereology, differential geometry, image analysis, image processing, mathematical morphology, stochastic geometry, statistics, pattern recognition, and related topics. The fields of application are not restricted and range from biomedicine, materials sciences and physics to geology and geography.
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