A robust method for fitting degree distributions of complex networks

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS ACS Applied Bio Materials Pub Date : 2022-12-13 DOI:10.1093/comnet/cnad023
Shane Mannion, Pádraig MacCarron
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Abstract

This work introduces a method for fitting to the degree distributions of complex network datasets, such that the most appropriate distribution from a set of candidate distributions is chosen while maximizing the portion of the distribution to which the model is fit. Current methods for fitting to degree distributions in the literature are inconsistent and often assume a priori what distribution the data are drawn from. Much focus is given to fitting to the tail of the distribution, while a large portion of the distribution below the tail is ignored. It is important to account for these low degree nodes, as they play crucial roles in processes such as percolation. Here we address these issues, using maximum likelihood estimators to fit to the entire dataset, or close to it. This methodology is applicable to any network dataset (or discrete empirical dataset), and we test it on over 25 network datasets from a wide range of sources, achieving good fits in all but a few cases. We also demonstrate that numerical maximization of the likelihood performs better than commonly used analytical approximations. In addition, we have made available a Python package which can be used to apply this methodology.
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复杂网络度分布拟合的鲁棒方法
这项工作介绍了一种拟合复杂网络数据集的度分布的方法,这样就可以从一组候选分布中选择最合适的分布,同时最大化模型拟合的分布部分。目前文献中拟合程度分布的方法是不一致的,并且通常假设数据是从什么分布中提取的先验。大部分的重点放在拟合分布的尾部,而忽略了尾部以下的大部分分布。考虑这些低度节点是很重要的,因为它们在渗流等过程中起着至关重要的作用。在这里,我们解决这些问题,使用最大似然估计器来拟合整个数据集,或接近它。这种方法适用于任何网络数据集(或离散经验数据集),我们在来自广泛来源的超过25个网络数据集上进行了测试,除了少数情况外,在所有情况下都取得了良好的拟合。我们还证明,数值最大化的似然执行比常用的解析近似更好。此外,我们还提供了一个Python包,可用于应用此方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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