Recovery of 3D Tractions Exerted by Cells on Fibrous Extracellular Matrices

Q4 Biochemistry, Genetics and Molecular Biology Molecular & Cellular Biomechanics Pub Date : 2019-01-01 DOI:10.32604/mcb.2019.07138
Dawei Song, Nicholas R Hugenberg, A. Oberai
{"title":"Recovery of 3D Tractions Exerted by Cells on Fibrous Extracellular Matrices","authors":"Dawei Song, Nicholas R Hugenberg, A. Oberai","doi":"10.32604/mcb.2019.07138","DOIUrl":null,"url":null,"abstract":"Tractions exerted by cells on the extracellular matrix (ECM) are critical in many important physiological and pathological processes such as embryonic morphogenesis, cell migration, wound healing, and cancer metastasis. Traction Force Microscopy (TFM) is a robust tool to quantify cellular tractions during cell-matrix interactions. It works by measuring the motion of fiducial markers inside the ECM in response to cellular tractions and using this information to infer the traction field. Most applications of this technique have heretofore assumed that the ECM is homogeneous and isotropic [1], although the native ECM is typically composed of fibrous networks, and thus heterogeneous and anisotropic. In this work, we present a novel nonlinear TFM approach to recover 3D tractions exerted by cells fully encapsulated in fibrous hydrogels that mimic the in-vivo cellular environment. We pose the problem as an inverse hyperelasticity problem, with the objective of determining the traction field that is consistent with the measured displacement field in the ECM. We formulate the inverse problem as a constrained minimization problem and develop an efficient adjoint-based minimization technique to solve it [2]. In particular, we account for the fibrous character of the ECM by employing a microstructure-based homogenization model that links the microscopic features of the fibrous gels to the macroscopic response. We apply our TFM approach to in-silico problems with realistic geometric models of NIH 3T3 and microglial cells. We find that the proposed algorithm is able to accurately recover the traction fields. By comparison with results obtained using isotropic models (e.g., Neo-Hookean model and Blatz model), we find that the error introduced by neglecting the fibrous nature of the ECM is significant. These results suggest that it is crucial to account for the microstructure of the ECM to accurately quantify cellular forces in physiologically relevant settings. In light of this, our algorithm represents a step toward more accurate, broadly-applicable 3D TFM.","PeriodicalId":48719,"journal":{"name":"Molecular & Cellular Biomechanics","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2019-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Molecular & Cellular Biomechanics","FirstCategoryId":"1087","ListUrlMain":"https://doi.org/10.32604/mcb.2019.07138","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
引用次数: 0

Abstract

Tractions exerted by cells on the extracellular matrix (ECM) are critical in many important physiological and pathological processes such as embryonic morphogenesis, cell migration, wound healing, and cancer metastasis. Traction Force Microscopy (TFM) is a robust tool to quantify cellular tractions during cell-matrix interactions. It works by measuring the motion of fiducial markers inside the ECM in response to cellular tractions and using this information to infer the traction field. Most applications of this technique have heretofore assumed that the ECM is homogeneous and isotropic [1], although the native ECM is typically composed of fibrous networks, and thus heterogeneous and anisotropic. In this work, we present a novel nonlinear TFM approach to recover 3D tractions exerted by cells fully encapsulated in fibrous hydrogels that mimic the in-vivo cellular environment. We pose the problem as an inverse hyperelasticity problem, with the objective of determining the traction field that is consistent with the measured displacement field in the ECM. We formulate the inverse problem as a constrained minimization problem and develop an efficient adjoint-based minimization technique to solve it [2]. In particular, we account for the fibrous character of the ECM by employing a microstructure-based homogenization model that links the microscopic features of the fibrous gels to the macroscopic response. We apply our TFM approach to in-silico problems with realistic geometric models of NIH 3T3 and microglial cells. We find that the proposed algorithm is able to accurately recover the traction fields. By comparison with results obtained using isotropic models (e.g., Neo-Hookean model and Blatz model), we find that the error introduced by neglecting the fibrous nature of the ECM is significant. These results suggest that it is crucial to account for the microstructure of the ECM to accurately quantify cellular forces in physiologically relevant settings. In light of this, our algorithm represents a step toward more accurate, broadly-applicable 3D TFM.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
细胞对纤维细胞外基质的三维牵引力恢复
细胞对细胞外基质(ECM)的牵引力在许多重要的生理和病理过程中起着至关重要的作用,如胚胎形态发生、细胞迁移、伤口愈合和癌症转移。牵引力显微镜(TFM)是一个强大的工具,以量化细胞-基质相互作用期间的细胞牵引力。它的工作原理是测量ECM内基准标记物响应细胞牵引力的运动,并利用这些信息推断牵引力场。迄今为止,该技术的大多数应用都假设ECM是均匀和各向同性的[1],尽管天然ECM通常由纤维网络组成,因此是不均匀和各向异性的。在这项工作中,我们提出了一种新的非线性TFM方法来恢复完全包裹在纤维水凝胶中的细胞所施加的三维牵引力,以模拟体内细胞环境。我们将该问题视为一个逆超弹性问题,目的是确定与ECM中测量的位移场一致的牵引场。我们将逆问题表述为约束最小化问题,并开发了一种有效的基于伴随的最小化技术来求解它[2]。特别是,我们通过采用基于微观结构的均质模型来解释ECM的纤维特性,该模型将纤维凝胶的微观特征与宏观响应联系起来。我们将我们的TFM方法应用于具有逼真的NIH 3T3和小胶质细胞几何模型的计算机问题。结果表明,该算法能够准确地恢复牵引场。通过与使用各向同性模型(例如Neo-Hookean模型和Blatz模型)获得的结果进行比较,我们发现忽略ECM的纤维性质所引入的误差是显著的。这些结果表明,在生理相关设置中,对ECM的微观结构进行精确量化是至关重要的。有鉴于此,我们的算法向更准确、更广泛适用的3D TFM迈出了一步。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Molecular & Cellular Biomechanics
Molecular & Cellular Biomechanics CELL BIOLOGYENGINEERING, BIOMEDICAL&-ENGINEERING, BIOMEDICAL
CiteScore
1.70
自引率
0.00%
发文量
21
期刊介绍: The field of biomechanics concerns with motion, deformation, and forces in biological systems. With the explosive progress in molecular biology, genomic engineering, bioimaging, and nanotechnology, there will be an ever-increasing generation of knowledge and information concerning the mechanobiology of genes, proteins, cells, tissues, and organs. Such information will bring new diagnostic tools, new therapeutic approaches, and new knowledge on ourselves and our interactions with our environment. It becomes apparent that biomechanics focusing on molecules, cells as well as tissues and organs is an important aspect of modern biomedical sciences. The aims of this journal are to facilitate the studies of the mechanics of biomolecules (including proteins, genes, cytoskeletons, etc.), cells (and their interactions with extracellular matrix), tissues and organs, the development of relevant advanced mathematical methods, and the discovery of biological secrets. As science concerns only with relative truth, we seek ideas that are state-of-the-art, which may be controversial, but stimulate and promote new ideas, new techniques, and new applications.
期刊最新文献
Hot Topics of Molecular and Cellular Biomechanics in 2022 CFD Study on Hemodynamic Characteristics of Inferior Vena Cava Filter Affected by Blood Vessel Diameter Can PAPE-Induced Increases in Jump Height Be Explained by Jumping Kinematics? Reconstruction of the Hindlimb Locomotion of Confuciusornis (Aves) and Its Implication for the Origin of Avian Flight Classification of Leukemia and Leukemoid Using VGG-16 Convolutional Neural Network Architecture
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1