Crystal engineering of co-crystal of nicotinic acid and pyrogallol: an experimental and theoretical electron density analysis

Alia Iqbal, A. Mehmood, S. Noureen, C. Lecomte, Maqsood Ahmed
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Abstract

Experimental electron density analysis by means of high-resolution X-ray diffraction data up to sinθ/λmax = 1.11 Å−1 at 100 (1) K has been performed to analyze the detailed structure and the strength of intermolecular interactions responsible for the formation of a new solid form of nicotinic acid (NA), cocrystallized with pyrogallol (PY). There are two NA–PY units in the asymmetric unit. The experimental results are compared with the results obtained from theoretical structure factors modeled using periodic boundary DFT calculations. Both refinements were carried out using the Hansen and Coppens multipolar formalism (in MoPro program). The non-centrosymmetric and polar nature of the crystal system rendered the multipolar refinement challenging which was addressed by involving the transferability principle. This study highlights the significance of the transferability principle in electron density modeling in non-routine situations. The 2:2 cocrystal of NA–PY exhibits a zigzag, brickwall and sheet-like layered structure in three dimensions and is stabilized by strong intra- and inter-molecular hydrogen bonding through N—H...O and O—H...O bonds, some of them due to the zwitterion nature of NA as well as weak interactions between the PY molecules. Ranking these interactions via topological analysis of the electron density shows the leading role of the NA–NA substructure which drives the organization of the cocrystals. These strong interactions between the NA zwitterions may explain why Z′ = 2.
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烟酸与邻苯三酚共晶的晶体工程:实验与理论的电子密度分析
利用高分辨率x射线衍射数据,在100 (1)K下进行了sinθ/λmax = 1.11 Å−1的实验电子密度分析,分析了与邻苯三酚(PY)共结晶的新型固体形式烟酸(NA)形成的详细结构和分子间相互作用的强度。在非对称单元中有两个NA-PY单元。实验结果与利用周期边界DFT计算的理论结构因子模型的结果进行了比较。两种改进都是使用Hansen和Coppens的多极形式(在MoPro程序中)进行的。晶体系统的非中心对称和极性性质使得多极精化具有挑战性,这是通过涉及可转移性原理来解决的。本研究强调了可转移性原理在非常规情况下电子密度建模中的重要意义。NA-PY的2:2共晶在三维上呈现出锯齿状、砖墙状和片状的层状结构,并通过N-H键在分子内和分子间形成强大的氢键来稳定其结构。O和O - h…O键,其中一些是由于NA的两性性质以及PY分子之间的弱相互作用。通过电子密度的拓扑分析对这些相互作用进行排序,表明NA-NA子结构在驱动共晶组织中的主导作用。NA两性离子之间的这些强相互作用可以解释为什么Z ' = 2。
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