首页 > 最新文献

Acta Crystallographica Section B Structural Science, Crystal Engineering and Materials最新文献

英文 中文
Chalcogen Chemistry: Fundamentals and Applications. Edited by Vito Lippolis, Claudio Santi, Eder J. Lenardão and Antonio L. Braga. Royal Society of Chemistry, 2023. Hardcover, pp. 728. Price EUR 156.00. ISBN 978-1-83916-422-4 铜绿化学:基础和应用。编辑:Vito Lippolis, Claudio Santi, Eder J. lenardao和Antonio L. Braga。皇家化学学会,2023。精装本,第728页。价格156.00欧元。ISBN 978-1-83916-422-4
Marc Fourmigué
Chalcogen Chemistry: Fundamentals and Applications. Edited by Vito Lippolis, Claudio Santi, Eder J. Lenardão and Antonio L. Braga. Royal Society of Chemistry, 2023. Hardcover, pp. 728. Price EUR 156.00. ISBN 978-1-83916-422-4
铜绿化学:基础和应用。编辑:Vito Lippolis, Claudio Santi, Eder J. lenardao和Antonio L. Braga。皇家化学学会,2023。精装本,第728页。价格156.00欧元。ISBN 978-1-83916-422-4
{"title":"<b>Chalcogen Chemistry: Fundamentals and Applications</b>. Edited by Vito Lippolis, Claudio Santi, Eder J. Lenardão and Antonio L. Braga. Royal Society of Chemistry, 2023. Hardcover, pp. 728. Price EUR 156.00. ISBN 978-1-83916-422-4","authors":"Marc Fourmigué","doi":"10.1107/s2052520623007771","DOIUrl":"https://doi.org/10.1107/s2052520623007771","url":null,"abstract":"Chalcogen Chemistry: Fundamentals and Applications. Edited by Vito Lippolis, Claudio Santi, Eder J. Lenardão and Antonio L. Braga. Royal Society of Chemistry, 2023. Hardcover, pp. 728. Price EUR 156.00. ISBN 978-1-83916-422-4","PeriodicalId":7080,"journal":{"name":"Acta Crystallographica Section B Structural Science, Crystal Engineering and Materials","volume":"37 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135886150","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis and structure of high-purity BaCe0.25Mn0.75O3: an improved material for thermochemical water splitting 高纯BaCe0.25Mn0.75O3的合成与结构:一种改进的热化学水裂解材料
Robert T. Bell, Nicholas A. Strange, Dan A. Plattenberger, S. Shulda, J. Park, A. Ambrosini, K. Heinselman, Josh Sugar, P. Parilla, E. Coker, A. McDaniel, D. Ginley
Solar thermochemical hydrogen production (STCH) via redox-active metal oxides is an approach for direct solar-driven hydrogen generation typically using a high-temperature redox cycle involving refractory oxides and steam. Typical cycles involve high-temperature reduction of oxides to form oxygen vacancies, followed by lower temperature reaction between oxygen vacancies and steam where the oxide is re-oxidized and the steam is reduced to hydrogen. Only a few materials have demonstrated reversible cycling under the typically harsh STCH conditions (e.g. 1500°C reduction, 900°C re-oxidation) and critical questions remain on the true reversibility of non-stoichiometric multi-cation oxide systems, significantly hampered by the lack of single-phase samples for these material systems. To date, most STCH processes have relied on CeO2 as a benchmark active material, but more recently, the 12R phase of BaCe0.25Mn0.75O3 (BCM) has demonstrated greater hydrogen-generation potential at lower peak temperatures. However, previous reports of 12R-BCM have included large fractions, > 10 wt%, of secondary phases, which complicate analysis of the stability and performance. A comprehensive understanding of the redox mechanism and reversibility of the process in BCM can only be achieved with nearly single-phase samples which, to date, have been difficult to produce. Here two approaches to BCM synthesis are reported: solid state and sol–gel-based routes. It is demonstrated that both routes can be tuned to produce the 12R structure with > 97 wt% yield when annealed ≥1450°C. Herein synchrotron-based diffraction measurements of rhombohedral 12R-BCM enabled characterization of the anisotropy between thermal expansion along the c-axis and within the ab plane. The impact of high-temperature redox cycling on the stability and phase fraction of the 12R-BCM polytype was also investigated. These results offer two viable routes for synthesis of high-purity 12R-BCM critically needed for evaluating the efficacy of BCM as a STCH material and validate its ability to split water at lower temperatures over extended numbers of redox cycles.
通过氧化还原活性金属氧化物的太阳能热化学制氢(STCH)是一种直接由太阳能驱动的制氢方法,通常使用包含难熔氧化物和蒸汽的高温氧化还原循环。典型的循环包括氧化物的高温还原形成氧空位,然后氧空位和蒸汽之间的低温反应,氧化物被重新氧化,蒸汽被还原成氢。只有少数材料在典型的恶劣STCH条件下(例如1500°C还原,900°C再氧化)表现出可逆循环,而非化学计量多阳离子氧化物体系的真正可逆性仍然存在关键问题,这些问题由于缺乏这些材料体系的单相样品而受到严重阻碍。迄今为止,大多数STCH工艺都依赖于CeO2作为基准活性材料,但最近,BaCe0.25Mn0.75O3 (BCM)的12R相在较低峰值温度下显示出更大的产氢潜力。然而,之前关于12R-BCM的报道中包含了大于10 wt%的二次相,这使得稳定性和性能的分析变得复杂。对BCM中氧化还原机制和过程可逆性的全面了解只能通过近单相样品来实现,迄今为止,这种样品很难生产。本文报道了两种合成BCM的方法:固态法和溶胶-凝胶法。结果表明,当退火温度≥1450°C时,这两种途径均可调谐产生产率> 97%的12R结构。在这里,基于同步加速器的菱形12R-BCM衍射测量使得沿c轴和ab平面的热膨胀各向异性的表征成为可能。研究了高温氧化还原循环对12R-BCM多型材料稳定性和相分数的影响。这些结果为高纯度12R-BCM的合成提供了两种可行的途径,这对于评估BCM作为STCH材料的功效以及验证其在较低温度下在延长的氧化还原循环中分解水的能力至关重要。
{"title":"Synthesis and structure of high-purity BaCe0.25Mn0.75O3: an improved material for thermochemical water splitting","authors":"Robert T. Bell, Nicholas A. Strange, Dan A. Plattenberger, S. Shulda, J. Park, A. Ambrosini, K. Heinselman, Josh Sugar, P. Parilla, E. Coker, A. McDaniel, D. Ginley","doi":"10.1107/s2052520622010393","DOIUrl":"https://doi.org/10.1107/s2052520622010393","url":null,"abstract":"Solar thermochemical hydrogen production (STCH) via redox-active metal oxides is an approach for direct solar-driven hydrogen generation typically using a high-temperature redox cycle involving refractory oxides and steam. Typical cycles involve high-temperature reduction of oxides to form oxygen vacancies, followed by lower temperature reaction between oxygen vacancies and steam where the oxide is re-oxidized and the steam is reduced to hydrogen. Only a few materials have demonstrated reversible cycling under the typically harsh STCH conditions (e.g. 1500°C reduction, 900°C re-oxidation) and critical questions remain on the true reversibility of non-stoichiometric multi-cation oxide systems, significantly hampered by the lack of single-phase samples for these material systems. To date, most STCH processes have relied on CeO2 as a benchmark active material, but more recently, the 12R phase of BaCe0.25Mn0.75O3 (BCM) has demonstrated greater hydrogen-generation potential at lower peak temperatures. However, previous reports of 12R-BCM have included large fractions, > 10 wt%, of secondary phases, which complicate analysis of the stability and performance. A comprehensive understanding of the redox mechanism and reversibility of the process in BCM can only be achieved with nearly single-phase samples which, to date, have been difficult to produce. Here two approaches to BCM synthesis are reported: solid state and sol–gel-based routes. It is demonstrated that both routes can be tuned to produce the 12R structure with > 97 wt% yield when annealed ≥1450°C. Herein synchrotron-based diffraction measurements of rhombohedral 12R-BCM enabled characterization of the anisotropy between thermal expansion along the c-axis and within the ab plane. The impact of high-temperature redox cycling on the stability and phase fraction of the 12R-BCM polytype was also investigated. These results offer two viable routes for synthesis of high-purity 12R-BCM critically needed for evaluating the efficacy of BCM as a STCH material and validate its ability to split water at lower temperatures over extended numbers of redox cycles.","PeriodicalId":7080,"journal":{"name":"Acta Crystallographica Section B Structural Science, Crystal Engineering and Materials","volume":"31 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79334854","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Preparation and crystallographic characterization of 1H-tetrazole/NaClO4 energetic cocrystal 1h -四氮唑/氯化钠高能共晶的制备及晶体学表征
Kazuki Inoue, S. Matsumoto, M. Kumasaki
Cocrystallization is a promising method for generating new energetic materials with improved performances. Herein, a novel energetic cocrystal composed of 1H-tetrazole/sodium perchlorate was prepared using the solvent evaporation method. This cocrystal is characterized as containing organic azole derivatives and an ionic perchlorate salt, which is used as an oxidizer in pyrotechnics. The crystal structure was determined via single-crystal X-ray diffraction. The as-prepared crystal exhibited a lamellar structure consisting of 1H-tetrazole and sodium perchlorate layers. A molecular structure comparison between the cocrystal and pristine ingredients revealed variations in the bond lengths and angles owing to the cocrystallization. The hydrogen bond formed by adjacent tetrazole rings was strengthened. The 1H-tetrazole/sodium perchlorate cocrystal was structurally compared with crystals previously reported to the Cambridge Structural Database including sodium perchlorate in lamellar structures. The lamellar structure of the cocrystal exhibited weak layer-to-layer interactions compared with those of the other crystals. Fourier transform infrared and Raman spectroscopy analyses were conducted, and the relationship between the spectroscopy results and the crystal/molecular structure are discussed. The results of the spectroscopic analyses exhibited peak shifts that indicate structural changes in bond lengths and angles owing to the cocrystallization.
共结晶是一种很有前途的制备新型高性能高能材料的方法。采用溶剂蒸发法制备了h -四唑/高氯酸钠的新型高能共晶。该共晶的特点是含有有机唑衍生物和离子高氯酸盐,高氯酸盐在烟火中用作氧化剂。通过单晶x射线衍射测定了晶体结构。制备的晶体呈现由h -四氮唑和高氯酸钠层组成的片层结构。通过对共晶和原始成分的分子结构比较,揭示了共晶导致的键长和键角的变化。相邻四唑环形成的氢键得到加强。将h -四氮唑/高氯酸钠共晶与剑桥结构数据库中先前报道的高氯酸钠片层结构晶体进行了结构比较。与其他晶体相比,该共晶的片层结构表现出较弱的层间相互作用。进行了傅里叶变换红外光谱和拉曼光谱分析,并讨论了光谱结果与晶体/分子结构的关系。光谱分析结果显示出峰移,表明由于共结晶导致键长和键角的结构变化。
{"title":"Preparation and crystallographic characterization of 1H-tetrazole/NaClO4 energetic cocrystal","authors":"Kazuki Inoue, S. Matsumoto, M. Kumasaki","doi":"10.1107/s2052520622010204","DOIUrl":"https://doi.org/10.1107/s2052520622010204","url":null,"abstract":"Cocrystallization is a promising method for generating new energetic materials with improved performances. Herein, a novel energetic cocrystal composed of 1H-tetrazole/sodium perchlorate was prepared using the solvent evaporation method. This cocrystal is characterized as containing organic azole derivatives and an ionic perchlorate salt, which is used as an oxidizer in pyrotechnics. The crystal structure was determined via single-crystal X-ray diffraction. The as-prepared crystal exhibited a lamellar structure consisting of 1H-tetrazole and sodium perchlorate layers. A molecular structure comparison between the cocrystal and pristine ingredients revealed variations in the bond lengths and angles owing to the cocrystallization. The hydrogen bond formed by adjacent tetrazole rings was strengthened. The 1H-tetrazole/sodium perchlorate cocrystal was structurally compared with crystals previously reported to the Cambridge Structural Database including sodium perchlorate in lamellar structures. The lamellar structure of the cocrystal exhibited weak layer-to-layer interactions compared with those of the other crystals. Fourier transform infrared and Raman spectroscopy analyses were conducted, and the relationship between the spectroscopy results and the crystal/molecular structure are discussed. The results of the spectroscopic analyses exhibited peak shifts that indicate structural changes in bond lengths and angles owing to the cocrystallization.","PeriodicalId":7080,"journal":{"name":"Acta Crystallographica Section B Structural Science, Crystal Engineering and Materials","volume":"17 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"87865128","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evolution of intermolecular contacts with temperature and pressure in bromoethane and iodoethane – a comparative study 溴乙烷和碘乙烷分子间接触随温度和压力变化的比较研究
M. Bujak, A. Olejniczak, M. Podsiadło
Preferences for formation and competition between halogen⋯halogen and halogen⋯H contacts have been studied for model compounds of monohalogenated ethanes.
对于单卤代乙烷的模型化合物,已经研究了卤素和卤素⋯H接触之间形成和竞争的偏好。
{"title":"Evolution of intermolecular contacts with temperature and pressure in bromoethane and iodoethane – a comparative study","authors":"M. Bujak, A. Olejniczak, M. Podsiadło","doi":"10.1107/S2052520622010149","DOIUrl":"https://doi.org/10.1107/S2052520622010149","url":null,"abstract":"Preferences for formation and competition between halogen⋯halogen and halogen⋯H contacts have been studied for model compounds of monohalogenated ethanes.","PeriodicalId":7080,"journal":{"name":"Acta Crystallographica Section B Structural Science, Crystal Engineering and Materials","volume":"29 1","pages":"868 - 875"},"PeriodicalIF":0.0,"publicationDate":"2022-11-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81603009","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Design of a series of cocrystals featuring isoniazid modified with diacetone alcohol 双丙酮醇改性异烟肼系列共晶的设计
M. Scheepers, A. Lemmerer
Eight cocrystals featuring an isoniazid derivative are synthesized and characterized. Most of the cocrystals show great similarity in hydrogen bonding between each other with only a few exceptions.
合成并表征了八个具有异烟肼衍生物的共晶。除少数例外,大多数共晶之间的氢键有很大的相似性。
{"title":"Design of a series of cocrystals featuring isoniazid modified with diacetone alcohol","authors":"M. Scheepers, A. Lemmerer","doi":"10.1107/S2052520622009532","DOIUrl":"https://doi.org/10.1107/S2052520622009532","url":null,"abstract":"Eight cocrystals featuring an isoniazid derivative are synthesized and characterized. Most of the cocrystals show great similarity in hydrogen bonding between each other with only a few exceptions.","PeriodicalId":7080,"journal":{"name":"Acta Crystallographica Section B Structural Science, Crystal Engineering and Materials","volume":"1953 1","pages":"857 - 867"},"PeriodicalIF":0.0,"publicationDate":"2022-11-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"87768741","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Synthesis and structural characterization of a new dinuclear platinum(III) complex, [Pt2Cl4(NH3)2{μ-HN=C(O)But}2] 新型双核铂(III)配合物[Pt2Cl4(NH3)2{μ-HN=C(O)But}2]的合成与结构表征
D. Vinci, D. Chateigner
The synthesis and the structural characterization of a new dinuclear platinum(III) complex are presented. Lantern-shaped platinum(III) complexes have been shown to have antitumor activity, so this new complex should be screened through antitumor screening tests.
介绍了一种新型双核铂(III)配合物的合成及其结构表征。灯笼形铂(III)配合物已被证明具有抗肿瘤活性,因此这种新的配合物应通过抗肿瘤筛选试验进行筛选。
{"title":"Synthesis and structural characterization of a new dinuclear platinum(III) complex, [Pt2Cl4(NH3)2{μ-HN=C(O)But}2]","authors":"D. Vinci, D. Chateigner","doi":"10.1107/S2052520622009660","DOIUrl":"https://doi.org/10.1107/S2052520622009660","url":null,"abstract":"The synthesis and the structural characterization of a new dinuclear platinum(III) complex are presented. Lantern-shaped platinum(III) complexes have been shown to have antitumor activity, so this new complex should be screened through antitumor screening tests.","PeriodicalId":7080,"journal":{"name":"Acta Crystallographica Section B Structural Science, Crystal Engineering and Materials","volume":"112 1","pages":"835 - 841"},"PeriodicalIF":0.0,"publicationDate":"2022-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"81183549","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Four-position disorder of cationic protonated guanylurea in a stable three-dimensional network in the structure of a triple salt decavanadate complex (HGU+)(H2Met2+)2(H3O+)(V10O28 6−)·8H2O 三元十氰酸盐配合物(HGU+)(H2Met2+)2(h30o +)(V10O28 6−)·8H2O结构中阳离子质子化冠脲在稳定三维网络中的四位无序性
Aungkana Chatkon, Joseph P. Haller, K. Haller
A triple salt of decavanadate, V10O28 6−, containing mixed organic guanylurea (diaminomethylideneurea cation, HGU+) and metforminium(2+) (H2Met2+) cations and hydronium (H3O+) cations, has been synthesized by heating metformin hydrochloride, picolinic acid, and sodium metavanadate in aqueous solution at pH 4 and 333 K followed by maintaining the solution at 300 K overnight to give an orange crystalline product. As commonly observed, the V10O28 6− anion lies on an inversion center. Charge is balanced by two H2Met2+ dications and two monocations, one HGU+ and one H3O+, substitutionally disordered about another inversion center. The HGU+ cation is further positionally disordered by rotation of 26.3 (4)° about an axis approximately along the direction of the three essentially collinear N atoms of the cation, thereby hydrogen bonding to two adjacent rows of cluster O atoms running diagonally across the equatorial plane of the V10O28 6− anion. The highly concerted nature of the HGU+...cluster interaction in each orientation suggests a synthon that likely preexisted in solution and perhaps, along with heat, contributes to the degradation of the metformin to HGU+. The structure of the salt exhibits a complex charge-stabilized hydrogen-bonded network involving extended C 4 4(8) chains of the water molecules and the H2Met2+ cations linking the chains into two-dimensional sheets parallel to the bc plane, and V10O28 6− anions linking those sheets into a three-dimensional structure through Ow—H...O, N—H...O and C—H...O intermolecular interactions. The disordered HGU+ cation and the H3O+ cation occupy spaces with excess volume in the three-dimensional network structure.
以盐酸二甲双胍、吡啶酸和偏氰酸钠为原料,在pH为4、333 K的水溶液中加热,并在300 K下加热一晚上,合成了一种含有混合有机胍脲(二氨基甲基脲阳离子,HGU+)、二甲双胍(2+)(H2Met2+)阳离子和水合氢离子(h30 +)的十氰酸盐v1028 6−。通常观察到,V10O28 6−阴离子位于反转中心。电荷由两个H2Met2+指示和两个单位(一个HGU+和一个h30 +)平衡,取代无序地围绕另一个倒置中心。HGU+阳离子大约沿着阳离子的三个共线N原子的方向绕轴旋转26.3(4)°,从而使氢键与V10O28 6−阴离子的赤道面对角线上相邻的两行O原子簇成键。HGU+的高度协同特性…每个方向上的团簇相互作用表明溶液中可能预先存在一种合成酶,并且可能与热一起有助于二甲双胍降解为HGU+。盐的结构呈现出一个复杂的电荷稳定的氢键网络,包括水分子的c44(8)链和H2Met2+阳离子将这些链连接成平行于bc平面的二维薄片,而V10O28 6 -阴离子通过低- h键连接这些薄片形成三维结构。O - h……O和碳氢键…O分子间相互作用。无序的HGU+阳离子和h30o +阳离子在三维网络结构中占据了体积过大的空间。
{"title":"Four-position disorder of cationic protonated guanylurea in a stable three-dimensional network in the structure of a triple salt decavanadate complex (HGU+)(H2Met2+)2(H3O+)(V10O28\u0000 6−)·8H2O","authors":"Aungkana Chatkon, Joseph P. Haller, K. Haller","doi":"10.1107/s2052520622008915","DOIUrl":"https://doi.org/10.1107/s2052520622008915","url":null,"abstract":"A triple salt of decavanadate, V10O28\u0000 6−, containing mixed organic guanylurea (diaminomethylideneurea cation, HGU+) and metforminium(2+) (H2Met2+) cations and hydronium (H3O+) cations, has been synthesized by heating metformin hydrochloride, picolinic acid, and sodium metavanadate in aqueous solution at pH 4 and 333 K followed by maintaining the solution at 300 K overnight to give an orange crystalline product. As commonly observed, the V10O28\u0000 6− anion lies on an inversion center. Charge is balanced by two H2Met2+ dications and two monocations, one HGU+ and one H3O+, substitutionally disordered about another inversion center. The HGU+ cation is further positionally disordered by rotation of 26.3 (4)° about an axis approximately along the direction of the three essentially collinear N atoms of the cation, thereby hydrogen bonding to two adjacent rows of cluster O atoms running diagonally across the equatorial plane of the V10O28\u0000 6− anion. The highly concerted nature of the HGU+...cluster interaction in each orientation suggests a synthon that likely preexisted in solution and perhaps, along with heat, contributes to the degradation of the metformin to HGU+. The structure of the salt exhibits a complex charge-stabilized hydrogen-bonded network involving extended C\u0000 4\u0000 4(8) chains of the water molecules and the H2Met2+ cations linking the chains into two-dimensional sheets parallel to the bc plane, and V10O28\u0000 6− anions linking those sheets into a three-dimensional structure through Ow—H...O, N—H...O and C—H...O intermolecular interactions. The disordered HGU+ cation and the H3O+ cation occupy spaces with excess volume in the three-dimensional network structure.","PeriodicalId":7080,"journal":{"name":"Acta Crystallographica Section B Structural Science, Crystal Engineering and Materials","volume":"17 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84914388","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
New refinement strategies for a pseudoatom databank – toward rapid electrostatic interaction energy estimations 伪原子数据库的新改进策略——面向快速静电相互作用能估计
S. Bojarowski, B. Gruza, D. Trzybiński, R. Kamiński, A. Hoser, Prashant Kumar, K. Woźniak, P. Dominiak
Pseudoatom databanks, collections of parameters from the multipole model of electron densities for various atom types, are used to replace the Independent Atom Model with the more accurate Transferable Aspherical Atom Model (TAAM) in crystal structure refinements. The databanks are also employed to reconstruct the electron density of a molecule, crystal or biomacromolecular complex in a fast yet accurate way and compute various properties such as the energy of electrostatic interactions, for example. A even faster but similarly accurate model for estimations of electrostatic energy exists called aug-PROmol [Bojarowski, Kumar & Dominiak (2016). ChemPhysChem, 17, 2455–2460]. A model analogous to aug-PROmol cannot be built from the current pseudoatom databanks, as they perform badly when truncated to the monopole level. Here, new strategies for multipole model refinements were sought, leading to better parametrization at the monopole level. This would allow the creation of a pseudoatom databank in a single route of model parametrization, which would be suitable for both crystal structure refinement and rapid electrostatic energy calculations. Here it is shown that the cumulative approach to multipole model refinements, as opposed to simultaneous or iterative refinements of all multipole model parameters (Pv , κ, Plm , κ′), leads to substantially different models of electron density. Cumulative refinement of two blocks of parameters, the first with Pv and κ and then the second with Plm and κ′, leads to the P v κ|P lm κ′ model having promising properties. The P v κ|P lm κ′ model is as good as the University at Buffalo DataBank (UBDB) in X-ray structure TAAM refinements and electrostatic energy estimations, especially for less polar molecules. When truncated to the monopole level, the P v κ model has a chance to replace aug-PROmol in fast yet accurate electrostatics energy calculations, although some improvements in κ parametrization for polar functional groups are still needed. The P v κ model is also a source of point charges which behave similarly to restrained electrostatic potential (RESP) charges in electrostatic interaction energy estimations.
伪原子数据库是各种原子类型的电子密度多极模型的参数集合,用于用更精确的可转移非球面原子模型(TAAM)代替独立原子模型来改进晶体结构。这些数据库还用于快速而准确地重建分子、晶体或生物大分子复合物的电子密度,并计算各种性质,例如静电相互作用的能量。存在一种更快但同样准确的静电能量估计模型,称为aug-PROmol [Bojarowski, Kumar & Dominiak(2016)]。化学工程学报,17,24(5):555 - 560。由于当前的伪原子数据库在截断到单极子水平时表现不佳,因此无法从当前的伪原子数据库中构建类似于aug-PROmol的模型。在这里,寻求多极模型改进的新策略,从而在单极水平上实现更好的参数化。这将允许在单一的模型参数化路线中创建伪原子数据库,这将适用于晶体结构精细和快速静电能量计算。本文表明,与所有多极模型参数(Pv, κ, Plm, κ ')的同时或迭代精化相比,多极模型精化的累积方法导致电子密度模型的本质不同。两个参数块的累积细化,第一个是Pv和κ,第二个是Plm和κ ',导致Pv κ|P lm κ '模型具有很好的性质。pv κ| pm κ '模型在x射线结构TAAM改进和静电能量估计方面与布法罗大学数据库(UBDB)一样好,特别是对于极性较低的分子。当截断到单极水平时,P v κ模型有机会在快速而准确的静电能量计算中取代aug-PROmol,尽管极性官能团的κ参数化仍然需要一些改进。pv κ模型也是点电荷的来源,其行为类似于静电相互作用能估计中的约束静电势(RESP)电荷。
{"title":"New refinement strategies for a pseudoatom databank – toward rapid electrostatic interaction energy estimations","authors":"S. Bojarowski, B. Gruza, D. Trzybiński, R. Kamiński, A. Hoser, Prashant Kumar, K. Woźniak, P. Dominiak","doi":"10.1107/s2052520622008800","DOIUrl":"https://doi.org/10.1107/s2052520622008800","url":null,"abstract":"Pseudoatom databanks, collections of parameters from the multipole model of electron densities for various atom types, are used to replace the Independent Atom Model with the more accurate Transferable Aspherical Atom Model (TAAM) in crystal structure refinements. The databanks are also employed to reconstruct the electron density of a molecule, crystal or biomacromolecular complex in a fast yet accurate way and compute various properties such as the energy of electrostatic interactions, for example. A even faster but similarly accurate model for estimations of electrostatic energy exists called aug-PROmol [Bojarowski, Kumar & Dominiak (2016). ChemPhysChem, 17, 2455–2460]. A model analogous to aug-PROmol cannot be built from the current pseudoatom databanks, as they perform badly when truncated to the monopole level. Here, new strategies for multipole model refinements were sought, leading to better parametrization at the monopole level. This would allow the creation of a pseudoatom databank in a single route of model parametrization, which would be suitable for both crystal structure refinement and rapid electrostatic energy calculations. Here it is shown that the cumulative approach to multipole model refinements, as opposed to simultaneous or iterative refinements of all multipole model parameters (Pv\u0000 , κ, Plm\u0000 , κ′), leads to substantially different models of electron density. Cumulative refinement of two blocks of parameters, the first with Pv\u0000 and κ and then the second with Plm\u0000 and κ′, leads to the P\u0000 \u0000 v\u0000 κ|P\u0000 \u0000 lm\u0000 κ′ model having promising properties. The P\u0000 \u0000 v\u0000 κ|P\u0000 \u0000 lm\u0000 κ′ model is as good as the University at Buffalo DataBank (UBDB) in X-ray structure TAAM refinements and electrostatic energy estimations, especially for less polar molecules. When truncated to the monopole level, the P\u0000 \u0000 v\u0000 κ model has a chance to replace aug-PROmol in fast yet accurate electrostatics energy calculations, although some improvements in κ parametrization for polar functional groups are still needed. The P\u0000 \u0000 v\u0000 κ model is also a source of point charges which behave similarly to restrained electrostatic potential (RESP) charges in electrostatic interaction energy estimations.","PeriodicalId":7080,"journal":{"name":"Acta Crystallographica Section B Structural Science, Crystal Engineering and Materials","volume":"1 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"88475812","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Zr3Mn3Sn4Ga: a new hexagonal Ti6Sn5-type quaternary intermetallic Zr3Mn3Sn4Ga:一种新型六方ti6sn5型四元金属间化合物
Thomas Clausse, L. Diop, N. Martin, R. Sibille, T. Mazet
The discovery of a new quaternary intermetallic compound of composition Zr3Mn3Sn4Ga during a survey of the Zr–Mn–Sn–Ga phase diagram is reported. Single-crystal X-ray diffraction reveals that the new compound crystallizes in a hexagonal lattice (space group P63/mmc, No. 194). The analysis of single-crystal X-ray diffraction data indicates that the atomic arrangement is an ordered variant of the high-temperature hexagonal Ti6Sn5 crystal structure. From a simple geometry point of view, the unit cell consists of GaZr3 octahedra chains and Mn chains growing along the sixfold symmetry axis c. The Mn chains are stacked within the ab basal plane in a kagome geometry, with large interatomic distances. The possible slight levels of Sn/Ga and Zr/Mn mixed occupancy based on additional results of electron probe microanalysis and single-crystal neutron diffraction are discussed. It is noteworthy that this compound is the first quaternary intermetallic discovered in this structure and the first Ti6Sn5 derivative bearing a magnetic metal, namely Mn, in the 6g position, which may give rise to interesting physical properties.
在对Zr-Mn-Sn-Ga相图的研究中,发现了一种新的由Zr3Mn3Sn4Ga组成的季际金属间化合物。单晶x射线衍射表明,新化合物在六方晶格中结晶(空间群P63/mmc, No. 194)。单晶x射线衍射数据分析表明,原子排列是高温六方Ti6Sn5晶体结构的有序变体。从简单的几何角度来看,单元胞由GaZr3八面体链和沿六重对称轴c生长的Mn链组成。Mn链在ab基面上以kagome几何形状堆叠,具有较大的原子间距离。根据电子探针微分析和单晶中子衍射的附加结果,讨论了Sn/Ga和Zr/Mn可能存在的轻微混合占比。值得注意的是,该化合物是在该结构中发现的第一个四元金属间化合物,也是第一个在6g位置上含有磁性金属Mn的Ti6Sn5衍生物,这可能会产生有趣的物理性质。
{"title":"Zr3Mn3Sn4Ga: a new hexagonal Ti6Sn5-type quaternary intermetallic","authors":"Thomas Clausse, L. Diop, N. Martin, R. Sibille, T. Mazet","doi":"10.1107/s2052520622009453","DOIUrl":"https://doi.org/10.1107/s2052520622009453","url":null,"abstract":"The discovery of a new quaternary intermetallic compound of composition Zr3Mn3Sn4Ga during a survey of the Zr–Mn–Sn–Ga phase diagram is reported. Single-crystal X-ray diffraction reveals that the new compound crystallizes in a hexagonal lattice (space group P63/mmc, No. 194). The analysis of single-crystal X-ray diffraction data indicates that the atomic arrangement is an ordered variant of the high-temperature hexagonal Ti6Sn5 crystal structure. From a simple geometry point of view, the unit cell consists of GaZr3 octahedra chains and Mn chains growing along the sixfold symmetry axis c. The Mn chains are stacked within the ab basal plane in a kagome geometry, with large interatomic distances. The possible slight levels of Sn/Ga and Zr/Mn mixed occupancy based on additional results of electron probe microanalysis and single-crystal neutron diffraction are discussed. It is noteworthy that this compound is the first quaternary intermetallic discovered in this structure and the first Ti6Sn5 derivative bearing a magnetic metal, namely Mn, in the 6g position, which may give rise to interesting physical properties.","PeriodicalId":7080,"journal":{"name":"Acta Crystallographica Section B Structural Science, Crystal Engineering and Materials","volume":"19 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"84057685","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
X-ray diffraction and Mössbauer spectroscopy study of oxoborate azoproite (Mg,Fe2+)2(Fe3+,Ti,Mg,Al)O2(BO3): an in situ temperature-dependent investigation (5 ≤ T ≤ 1650 K) 氧硼酸偶氮酸盐(Mg,Fe2+)2(Fe3+,Ti,Mg,Al)O2(BO3)的x射线衍射和Mössbauer光谱研究:原位温度依赖性研究(5≤T≤1650 K)
Y. Biryukov, A. Zinnatullin, Irina O. Levashova, A. Shablinskii, M. Cherosov, R. Bubnova, F. Vagizov, M. Krzhizhanovskaya, S. Filatov, V. Shilovskikh, I. Pekov
This work is devoted to an investigation of elemental composition, crystal structure and thermal expansion of natural oxoborate azoproite from the Tazheran massif (Siberia, Russia) in the temperature range 5–1650 K. Elemental composition was determined by energy-dispersive X-ray spectroscopy (EDX). Its empirical formula based on five oxygen atoms is (Mg1.81Fe2+ 0.19)∑2.00(Fe3+ 0.36Ti0.26Mg0.26Al0.12)∑1.00O2(BO3). Local environment, oxidation states and ratio of Fe atoms are determined using Mössbauer spectroscopy and compared with EDX and single-crystal X-ray diffraction (SCXRD) data. A refinement of the crystal structure from SCXRD data collected at 293 K was provided for the first time. The structure could be described both in terms of cation- and anion-centered polyhedra. It is composed of vertex- and edge-sharing metal–oxygen [MO6] n − octahedra that form extended zigzag chains along the a axis building up a framework with the [BO3]3− triangles located in its distorted trigonal channels. From the other point of view, there are double chains consisting of oxocentred [OM 4] n + tetrahedra and [OM 5] n + tetragonal pyramids forming six-membered rings with the triangles in its cavities. Four non-equivalent Mn + sites are occupied by cations as follows: M(1) (2a) and M(2) (2d) – Mg, M(3) (4g) – Mg and Fe2+, M(4) (4h) – Fe3+, Ti4+, Mg and Al3+. According to differential scanning calorimetry, low- and high-temperature powder X-ray diffraction (LT- and HT-XRD) data, Mössbauer spectroscopy and magnetometry data (5 ≤ T ≤ 1650 K), there are no phase transitions obtained in the temperature range investigated. However, some anomalies in temperature dependencies of unit-cell parameters caused by a partial Fe2+ → Fe3+ oxidation are found in the range 873–1173 K. Azoproite melts at a temperature higher than 1600 K. Eigenvalues of the thermal expansion tensor are calculated for the oxoborate and thermal expansion is described in comparison with its crystal structure.
本文研究了俄罗斯西伯利亚塔镇然地块5 ~ 1650 K温度范围内天然氧硼酸盐偶氮proite的元素组成、晶体结构和热膨胀。元素组成由能量色散x射线光谱(EDX)测定。其基于5个氧原子的经验公式为(Mg1.81Fe2+ 0.19)∑2.00(Fe3+ 0.36Ti0.26Mg0.26Al0.12)∑1.00O2(BO3)。利用Mössbauer光谱法测定了局部环境、氧化态和铁原子比例,并与EDX和单晶x射线衍射(SCXRD)数据进行了比较。在293 K下收集的SCXRD数据首次提供了晶体结构的细化。该结构可以用正离子中心多面体和阴离子中心多面体来描述。它由顶点共享和边共享的金属氧[MO6] n -八面体组成,它们沿着a轴形成延伸的之字形链,形成一个框架,[BO3]3 -三角形位于其扭曲的三角形通道中。从另一个角度来看,双链由[OM 4] n +四面体和[OM 5] n +四面体组成,形成六元环,其腔中有三角形。四个不相等的Mn +位置被以下阳离子占据:M(1) (2a)和M(2) (2d) - Mg, M(3) (4g) - Mg和Fe2+, M(4) (4h) - Fe3+, Ti4+, Mg和Al3+。根据差示扫描量热法、低温和高温粉末x射线衍射(LT-和HT-XRD)数据、Mössbauer光谱和磁强计数据(5≤T≤1650 K),在所研究的温度范围内没有得到相变。然而,在873 ~ 1173 K范围内,由Fe2+→Fe3+部分氧化引起的单元胞参数的温度依赖性出现了一些异常。偶氮盐在高于1600k的温度下熔化。计算了氧硼酸盐的热膨胀张量特征值,并将其与晶体结构进行了比较。
{"title":"X-ray diffraction and Mössbauer spectroscopy study of oxoborate azoproite (Mg,Fe2+)2(Fe3+,Ti,Mg,Al)O2(BO3): an in situ temperature-dependent investigation (5 ≤ T ≤ 1650 K)","authors":"Y. Biryukov, A. Zinnatullin, Irina O. Levashova, A. Shablinskii, M. Cherosov, R. Bubnova, F. Vagizov, M. Krzhizhanovskaya, S. Filatov, V. Shilovskikh, I. Pekov","doi":"10.1107/s2052520622009349","DOIUrl":"https://doi.org/10.1107/s2052520622009349","url":null,"abstract":"This work is devoted to an investigation of elemental composition, crystal structure and thermal expansion of natural oxoborate azoproite from the Tazheran massif (Siberia, Russia) in the temperature range 5–1650 K. Elemental composition was determined by energy-dispersive X-ray spectroscopy (EDX). Its empirical formula based on five oxygen atoms is (Mg1.81Fe2+\u0000 0.19)∑2.00(Fe3+\u0000 0.36Ti0.26Mg0.26Al0.12)∑1.00O2(BO3). Local environment, oxidation states and ratio of Fe atoms are determined using Mössbauer spectroscopy and compared with EDX and single-crystal X-ray diffraction (SCXRD) data. A refinement of the crystal structure from SCXRD data collected at 293 K was provided for the first time. The structure could be described both in terms of cation- and anion-centered polyhedra. It is composed of vertex- and edge-sharing metal–oxygen [MO6]\u0000 n\u0000 \u0000 − octahedra that form extended zigzag chains along the a axis building up a framework with the [BO3]3− triangles located in its distorted trigonal channels. From the other point of view, there are double chains consisting of oxocentred [OM\u0000 4]\u0000 n\u0000 \u0000 + tetrahedra and [OM\u0000 5]\u0000 n\u0000 \u0000 + tetragonal pyramids forming six-membered rings with the triangles in its cavities. Four non-equivalent Mn\u0000 \u0000 + sites are occupied by cations as follows: M(1) (2a) and M(2) (2d) – Mg, M(3) (4g) – Mg and Fe2+, M(4) (4h) – Fe3+, Ti4+, Mg and Al3+. According to differential scanning calorimetry, low- and high-temperature powder X-ray diffraction (LT- and HT-XRD) data, Mössbauer spectroscopy and magnetometry data (5 ≤ T ≤ 1650 K), there are no phase transitions obtained in the temperature range investigated. However, some anomalies in temperature dependencies of unit-cell parameters caused by a partial Fe2+ → Fe3+ oxidation are found in the range 873–1173 K. Azoproite melts at a temperature higher than 1600 K. Eigenvalues of the thermal expansion tensor are calculated for the oxoborate and thermal expansion is described in comparison with its crystal structure.","PeriodicalId":7080,"journal":{"name":"Acta Crystallographica Section B Structural Science, Crystal Engineering and Materials","volume":"18 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2022-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"82701478","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
期刊
Acta Crystallographica Section B Structural Science, Crystal Engineering and Materials
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1