Sequence determination and resonance assignments of an Azomonas siderophore using 13C natural abundance 13C–1H HNCA experiment

Emeric Wasielewski , Mohamed A. Abdallah , Pavel Kyslik , Bruno Kieffer
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引用次数: 1

Abstract

The determination of the amino acid sequence of small peptides as siderophores is commonly performed using long-range HMBC correlation experiments. However, this type of experiment can lead to ambiguities in the assignment resulting in erroneous primary sequence determination. In this paper, we propose to use an HNCA type experiment on a 15N-labelled sample in order to avoid these ambiguities. This experiment was successfully used to determine the primary sequence of azoverdin, a siderophore produced by Azomonas.

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利用13C自然丰度13C - 1h HNCA实验测定氮单胞菌铁载体的序列和共振配位
小肽作为铁载体的氨基酸序列的测定通常使用远程HMBC相关实验进行。然而,这种类型的实验可能导致分配的模糊性,从而导致错误的主要序列确定。在本文中,我们建议在15n标记的样品上使用HNCA型实验,以避免这些歧义。本实验成功地测定了偶氮单胞菌产生的铁载体偶氮素的一级序列。
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