Exploration of bioactive compounds from Mangifera indica (Mango) as probable inhibitors of thymidylate synthase and nuclear factor kappa-B (NF-Κb) in colorectal cancer management

Q2 Physics and Astronomy Physical Sciences Reviews Pub Date : 2023-03-24 DOI:10.1515/psr-2022-0282
M. Abdul-Hammed, I. Bello, M. Olajide, I. O. Adedotun, Tolulope Irapada Afolabi, Ayobami Abimbola Ibironke, Barakat Dasola Adebayo
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Abstract

Abstract This research is aimed at investigating the anti-colorectal cancer activities of phytochemicals from Mangifera indica (Mango) via the inhibition of thymidylate synthase (TS) and Nuclear Factor kappa B (NF–κB) using computational chemistry tools. Ligands (141 phytochemicals previously isolated from mangoes) and reference drugs (Raltitrexed and Emetine), the drug inhibitors of TS and NF–κB, respectively) were subjected to screening via ADMET profiling, drug-likeness analysis, oral bioavailability, PASS profile, and molecular interactions. Ligands that passed the previously mentioned screening were docked in duplicate against the target receptors (TS and NF–κB) using PyRx software. The mean values were calculated to obtain suitable docking scores. The analysis showed that TS was strongly inhibited by Friedelan-3beta-Ol with its lower binding energy of −9.0 kcal/mol more than Raltitrexed with a binding energy of −8.7 kcal/mol. NF–κB was also inhibited by Friedelan-3beta-Ol and Friedelin with binding energies of −8.0 and −8.1 kcal/mol, respectively, more than Emetine with a binding energy of −6.4 kcal/mol. These two phytochemicals performed much better than the standard drugs, thus selected as the best hits compounds because of their ADMET profile, drug-likeness properties, bioactivity, oral bioavailability, PASS prediction, binding affinities, and their interactions with the amino acids in the active sites of the receptors. Therefore, further studies are necessary for the validation of these claims toward the development of new effective and safer anti-colorectal cancer drugs.
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探索从芒果中提取的生物活性化合物作为胸腺苷酸合成酶和核因子κ b (NF-Κb)在结直肠癌治疗中的可能抑制剂
摘要本研究旨在利用计算化学工具研究芒果植物化学物质通过抑制胸腺苷酸合成酶(TS)和核因子κB (NF -κB)的抗结直肠癌活性。通过ADMET谱分析、药物相似性分析、口服生物利用度、PASS谱分析和分子相互作用筛选配体(先前从芒果中分离的141种植物化学物质)和参比药物(分别为TS和NF -κB药物抑制剂Raltitrexed和Emetine)。通过上述筛选的配体使用PyRx软件与靶受体(TS和NF -κB)对接。计算平均值以获得合适的对接分数。分析表明,freelan -3 β - ol对TS有较强的抑制作用,其结合能较低,为- 9.0 kcal/mol,而ralittrexed的结合能为- 8.7 kcal/mol。friedran -3 β - ol和friedrin的结合能分别为−8.0和−8.1 kcal/mol,比Emetine的结合能−6.4 kcal/mol更能抑制NF -κB。由于这两种植物化学物质的ADMET谱、药物相似特性、生物活性、口服生物利用度、PASS预测、结合亲和力以及它们与受体活性位点氨基酸的相互作用,它们被选为最佳命中化合物。因此,需要进一步的研究来验证这些说法,以开发新的有效和更安全的抗结直肠癌药物。
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来源期刊
Physical Sciences Reviews
Physical Sciences Reviews MULTIDISCIPLINARY SCIENCES-
CiteScore
2.40
自引率
0.00%
发文量
173
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