Analysis of Network Models with Neuron-Astrocyte Interactions.

IF 2.7 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Neuroinformatics Pub Date : 2023-04-01 DOI:10.1007/s12021-023-09622-w
Tiina Manninen, Jugoslava Aćimović, Marja-Leena Linne
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引用次数: 2

Abstract

Neural networks, composed of many neurons and governed by complex interactions between them, are a widely accepted formalism for modeling and exploring global dynamics and emergent properties in brain systems. In the past decades, experimental evidence of computationally relevant neuron-astrocyte interactions, as well as the astrocytic modulation of global neural dynamics, have accumulated. These findings motivated advances in computational glioscience and inspired several models integrating mechanisms of neuron-astrocyte interactions into the standard neural network formalism. These models were developed to study, for example, synchronization, information transfer, synaptic plasticity, and hyperexcitability, as well as classification tasks and hardware implementations. We here focus on network models of at least two neurons interacting bidirectionally with at least two astrocytes that include explicitly modeled astrocytic calcium dynamics. In this study, we analyze the evolution of these models and the biophysical, biochemical, cellular, and network mechanisms used to construct them. Based on our analysis, we propose how to systematically describe and categorize interaction schemes between cells in neuron-astrocyte networks. We additionally study the models in view of the existing experimental data and present future perspectives. Our analysis is an important first step towards understanding astrocytic contribution to brain functions. However, more advances are needed to collect comprehensive data about astrocyte morphology and physiology in vivo and to better integrate them in data-driven computational models. Broadening the discussion about theoretical approaches and expanding the computational tools is necessary to better understand astrocytes' roles in brain functions.

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神经元-星形胶质细胞相互作用的网络模型分析。
神经网络由许多神经元组成,并由神经元之间复杂的相互作用所控制,是一种被广泛接受的用于建模和探索脑系统全局动力学和紧急特性的形式。在过去的几十年里,计算相关的神经元-星形胶质细胞相互作用的实验证据,以及星形胶质细胞对全局神经动力学的调节,已经积累起来。这些发现推动了计算神经胶质科学的发展,并启发了一些将神经元-星形胶质细胞相互作用机制整合到标准神经网络形式体系中的模型。这些模型被用来研究同步、信息传递、突触可塑性和超兴奋性,以及分类任务和硬件实现。我们在此着重于至少两个神经元与至少两个星形胶质细胞双向相互作用的网络模型,其中包括明确建模的星形胶质细胞钙动力学。在这项研究中,我们分析了这些模型的演变以及用于构建它们的生物物理、生化、细胞和网络机制。基于我们的分析,我们提出了如何系统地描述和分类神经元-星形胶质细胞网络中细胞之间的相互作用方案。我们还根据现有的实验数据和未来的展望来研究这些模型。我们的分析是理解星形细胞对大脑功能的贡献的重要的第一步。然而,在收集体内星形胶质细胞形态和生理的综合数据,并将其更好地整合到数据驱动的计算模型中,还需要取得更多的进展。为了更好地理解星形胶质细胞在脑功能中的作用,扩大对理论方法和计算工具的讨论是必要的。
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来源期刊
Neuroinformatics
Neuroinformatics 医学-计算机:跨学科应用
CiteScore
6.00
自引率
6.70%
发文量
54
审稿时长
3 months
期刊介绍: Neuroinformatics publishes original articles and reviews with an emphasis on data structure and software tools related to analysis, modeling, integration, and sharing in all areas of neuroscience research. The editors particularly invite contributions on: (1) Theory and methodology, including discussions on ontologies, modeling approaches, database design, and meta-analyses; (2) Descriptions of developed databases and software tools, and of the methods for their distribution; (3) Relevant experimental results, such as reports accompanie by the release of massive data sets; (4) Computational simulations of models integrating and organizing complex data; and (5) Neuroengineering approaches, including hardware, robotics, and information theory studies.
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