Identification of Polymorphisms in the HERC2-OCA2 Gene Locus and their Association with Feather Color in Quail.

IF 1.8 4区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE Journal of Poultry Science Pub Date : 2023-01-01 DOI:10.2141/jpsa.2023013
Xiaohui Zhang, Yanxia Qi, Youzhi Pang, Bingjie Yuan, Xiaolong Li
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Abstract

Mutations in the HERC2 and OCA2 genes have the potential to affect pigment deposition and alter feather color in birds. Therefore, in this study, we evaluated HERC2-OCA2 gene locus polymorphisms in Korean and Beijing white quails using RNA-Seq and KASP technology. The expression levels of HERC2 and OCA2 mRNA in skin tissues were analyzed using RT-qPCR. Ten single nucleotide polymorphisms were identified by RNA-Seq, of which three (n.117627564T>A, n.117674275T>G, n.117686226A>C) exhibited significant association with feather color in quail. The expression of OCA2 mRNA was significantly lower in the skin of Beijing white quails than that in the skin of Korean quails. These results suggested that variants in HERC2-OCA2 intergenic region could influence the expression of OCA2, which may underlie diluted feather color in the Beijing white quail.

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鹌鹑HERC2-OCA2基因位点多态性鉴定及其与羽毛颜色的关系
HERC2和OCA2基因的突变有可能影响鸟类色素沉积和改变羽毛颜色。因此,本研究采用RNA-Seq和KASP技术对韩国白鹌鹑和北京白鹌鹑HERC2-OCA2基因位点多态性进行了分析。采用RT-qPCR分析皮肤组织中HERC2和OCA2 mRNA的表达水平。通过RNA-Seq鉴定出10个单核苷酸多态性,其中3个多态性(n.117627564T>A、n.117674275T>G、n.117686226A>C)与鹌鹑羽毛颜色显著相关。OCA2 mRNA在北京白鹌鹑皮肤中的表达显著低于在韩国鹌鹑皮肤中的表达。这些结果表明,HERC2-OCA2基因间区变异可能影响OCA2的表达,这可能是北京白鹌鹑羽毛颜色变淡的原因。
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来源期刊
Journal of Poultry Science
Journal of Poultry Science AGRICULTURE, DAIRY & ANIMAL SCIENCE-
CiteScore
2.80
自引率
13.30%
发文量
26
审稿时长
12 months
期刊介绍: The Journal of Poultry Science will publish original reports and reviews which either make an original contribution to fundamental science or are of obvious application to the industry. Subjects which are covered include: breeding and genetics, nutrition and feeds, physiology, reproduction, immunology, behavior, environmental science, management and housing welfare, processing and products, and health in poultry. Submission of original articles to the Journal is open to all poultry researchers. The review articles are invited papers written by international outstanding researchers. Articles will be published in English, American style.
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