A simple cognitive model explains movement decisions in zebrafish while following leaders.

IF 2 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Physical biology Pub Date : 2023-05-17 DOI:10.1088/1478-3975/acd298
Lital Oscar, Liang Li, Dan Gorbonos, Iain Couzin, Nir S Gov
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引用次数: 3

Abstract

While moving, animals must frequently make decisions about their future travel direction, whether they are alone or in a group. Here we investigate this process for zebrafish (Danio rerio), which naturally move in cohesive groups. Employing state-of-the-art virtual reality, we study how real fish (RF) follow one or several moving, virtual conspecifics (leaders). These data are used to inform, and test, a model of social response that includes a process of explicit decision-making, whereby the fish can decide which of the virtual conspecifics to follow, or to follow in some average direction. This approach is in contrast with previous models where the direction of motion was based on a continuous computation, such as directional averaging. Building upon a simplified version of this model (Sridharet al2021Proc. Natl Acad. Sci.118e2102157118), which was limited to a one-dimensional projection of the fish motion, we present here a model that describes the motion of the RF as it swims freely in two-dimensions. Motivated by experimental observations, the swim speed of the fish in this model uses a burst-and-coast swimming pattern, with the burst frequency being dependent on the distance of the fish from the followed conspecific(s). We demonstrate that this model is able to explain the observed spatial distribution of the RF behind the virtual conspecifics in the experiments, as a function of their average speed and number. In particular, the model naturally explains the observed critical bifurcations for a freely swimming fish, which appear in the spatial distributions whenever the fish makes a decision to follow only one of the virtual conspecifics, instead of following them as an averaged group. This model can provide the foundation for modeling a cohesive shoal of swimming fish, while explicitly describing their directional decision-making process at the individual level.

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一个简单的认知模型解释了斑马鱼在跟随领导者时的运动决策。
在移动的过程中,动物必须经常决定它们未来的移动方向,无论它们是单独的还是成群的。在这里,我们研究了斑马鱼(Danio rerio)的这一过程,它们自然地在有凝聚力的群体中移动。利用最先进的虚拟现实技术,我们研究了真实的鱼(RF)如何跟随一个或几个移动的虚拟同体(领导者)。这些数据被用来告知和测试一个社会反应模型,该模型包括一个明确的决策过程,在这个过程中,鱼可以决定跟随哪个虚拟的同类,或者沿着某个平均方向跟随。这种方法与之前的模型不同,之前的模型中,运动方向是基于连续计算的,比如方向平均。基于该模型的简化版本(Sridharet al2021Proc)。Natl Acad. Sci.118e2102157118),它被限制为鱼运动的一维投影,我们在这里提出了一个模型,描述了RF在二维自由游动时的运动。受实验观察的启发,该模型中鱼的游泳速度采用突发-海岸游泳模式,突发频率取决于鱼与随后的同体的距离。我们证明,该模型能够解释实验中观察到的虚拟共体后射频的空间分布,作为它们的平均速度和数量的函数。特别是,该模型很自然地解释了观察到的自由游动的鱼的临界分岔,当鱼决定只跟随一个虚拟的同种体,而不是作为一个平均群体跟随它们时,它就会出现在空间分布中。该模型可以为建模一个有凝聚力的鱼群提供基础,同时明确地描述了它们在个体层面的定向决策过程。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Physical biology
Physical biology 生物-生物物理
CiteScore
4.20
自引率
0.00%
发文量
50
审稿时长
3 months
期刊介绍: Physical Biology publishes articles in the broad interdisciplinary field bridging biology with the physical sciences and engineering. This journal focuses on research in which quantitative approaches – experimental, theoretical and modeling – lead to new insights into biological systems at all scales of space and time, and all levels of organizational complexity. Physical Biology accepts contributions from a wide range of biological sub-fields, including topics such as: molecular biophysics, including single molecule studies, protein-protein and protein-DNA interactions subcellular structures, organelle dynamics, membranes, protein assemblies, chromosome structure intracellular processes, e.g. cytoskeleton dynamics, cellular transport, cell division systems biology, e.g. signaling, gene regulation and metabolic networks cells and their microenvironment, e.g. cell mechanics and motility, chemotaxis, extracellular matrix, biofilms cell-material interactions, e.g. biointerfaces, electrical stimulation and sensing, endocytosis cell-cell interactions, cell aggregates, organoids, tissues and organs developmental dynamics, including pattern formation and morphogenesis physical and evolutionary aspects of disease, e.g. cancer progression, amyloid formation neuronal systems, including information processing by networks, memory and learning population dynamics, ecology, and evolution collective action and emergence of collective phenomena.
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