Jie Li, Run-Yu Chang, Lin-Feng Chen, Su-Hai Qian, Rong-Yun Wang, Ji-le Lan, Lin Huang, Xing-Hong Ding
{"title":"Potential Targets and Mechanisms of Jiedu Quyu Ziyin Decoction for Treating SLE-GIOP: Based on Network Pharmacology and Molecular Docking.","authors":"Jie Li, Run-Yu Chang, Lin-Feng Chen, Su-Hai Qian, Rong-Yun Wang, Ji-le Lan, Lin Huang, Xing-Hong Ding","doi":"10.1155/2023/8942415","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Systemic lupus erythematosus (SLE) is characterized by poor regulation of the immune response leading to chronic inflammation and multiple organ dysfunction. Glucocorticoid (GC) is currently one of the main treatments. However, a high dose or prolonged use of GC may result in glucocorticoid-induced osteoporosis (GIOP). Jiedu Quyu Ziyin decoction (JP) is effective in treating SLE and previous clinical studies have proved that JP can prevent and treat SLE steroid osteoporosis (SLE-GIOP). We aim to examine JPs main mechanism on SLE-GIOP through network pharmacology and molecular docking.</p><p><strong>Methods: </strong>TCMSP and TCMID databases were used to screen potential active compounds and targets of JP. The SLE-GIOP targets are collected from GeneCards, OMIM, PharmGkb, TTD, and DrugBank databases. R software was used to obtain the cross-targets of JP and SLE-GIOP and to perform GO and KEGG enrichment analysis. Cytoscape software was used to make the Chinese Medicines-Active Ingredient-Intersection Targets network diagram. STRING database construct protein-protein interaction network and obtain the core targets. Auto Dock Tools and Pymol software were used for docking.</p><p><strong>Results: </strong>Fifty eight targets overlapped between JP and SLE-GIOP were suggested as potential targets of JP in the treatment of SLE-GIOP. Network topology analysis identified five core targets. GO enrichment analysis was obtained 1,968 items, and the top 10 biological process, closeness centrality, and molecular function were displayed. A total of 154 signaling pathways were obtained by KEGG enrichment analysis, and the top 30 signaling pathways were displayed. JP was well bound by MAPK1, TP53, and MYC according to the molecular docking results.</p><p><strong>Conclusion: </strong>We investigated the potential targets and signaling pathways of JP against SLE-GIOP in this study. It shows that JP is most likely to achieve the purpose of treating SLE-GIOP by promoting the proliferation and differentiation of osteoblasts. A solid theoretical foundation will be provided for the future study of clinical and experimental topics.</p>","PeriodicalId":15952,"journal":{"name":"Journal of Immunology Research","volume":null,"pages":null},"PeriodicalIF":3.5000,"publicationDate":"2023-03-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10072964/pdf/","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Immunology Research","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1155/2023/8942415","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2023/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"IMMUNOLOGY","Score":null,"Total":0}
引用次数: 1
Abstract
Background: Systemic lupus erythematosus (SLE) is characterized by poor regulation of the immune response leading to chronic inflammation and multiple organ dysfunction. Glucocorticoid (GC) is currently one of the main treatments. However, a high dose or prolonged use of GC may result in glucocorticoid-induced osteoporosis (GIOP). Jiedu Quyu Ziyin decoction (JP) is effective in treating SLE and previous clinical studies have proved that JP can prevent and treat SLE steroid osteoporosis (SLE-GIOP). We aim to examine JPs main mechanism on SLE-GIOP through network pharmacology and molecular docking.
Methods: TCMSP and TCMID databases were used to screen potential active compounds and targets of JP. The SLE-GIOP targets are collected from GeneCards, OMIM, PharmGkb, TTD, and DrugBank databases. R software was used to obtain the cross-targets of JP and SLE-GIOP and to perform GO and KEGG enrichment analysis. Cytoscape software was used to make the Chinese Medicines-Active Ingredient-Intersection Targets network diagram. STRING database construct protein-protein interaction network and obtain the core targets. Auto Dock Tools and Pymol software were used for docking.
Results: Fifty eight targets overlapped between JP and SLE-GIOP were suggested as potential targets of JP in the treatment of SLE-GIOP. Network topology analysis identified five core targets. GO enrichment analysis was obtained 1,968 items, and the top 10 biological process, closeness centrality, and molecular function were displayed. A total of 154 signaling pathways were obtained by KEGG enrichment analysis, and the top 30 signaling pathways were displayed. JP was well bound by MAPK1, TP53, and MYC according to the molecular docking results.
Conclusion: We investigated the potential targets and signaling pathways of JP against SLE-GIOP in this study. It shows that JP is most likely to achieve the purpose of treating SLE-GIOP by promoting the proliferation and differentiation of osteoblasts. A solid theoretical foundation will be provided for the future study of clinical and experimental topics.
背景:系统性红斑狼疮(SLE)的特点是免疫反应调节不良,导致慢性炎症和多器官功能障碍。糖皮质激素(GC)是目前的主要治疗方法之一。然而,高剂量或长期使用GC可能导致糖皮质激素诱导的骨质疏松症(GIOP)。解毒祛瘀滋阴汤治疗SLE疗效确切,已有临床研究证实其能防治SLE激素性骨质疏松症。我们的目的是通过网络药理学和分子对接来研究JPs对SLE-GOP的主要机制。方法:利用TCMSP和TCMID数据库筛选JP的潜在活性化合物和靶标。SLE-GOP靶标来自GeneCards、OMIM、PharmGkb、TTD和DrugBank数据库。R软件用于获得JP和SLE-GOOP的交叉靶标,并进行GO和KEGG富集分析。利用Cytoscape软件制作中药有效成分交叉靶标网络图。STRING数据库构建蛋白质-蛋白质相互作用网络并获得核心靶标。使用Auto Dock Tools和Pymol软件进行对接。结果:JP和SLE-GOP重叠的58个靶点被认为是JP治疗SLE-GOOP的潜在靶点。网络拓扑分析确定了五个核心目标。GO富集分析共获得1968个项目,显示了前10名的生物学过程、紧密中心性和分子功能。KEGG富集分析共获得154条信号通路,并显示了前30条信号通路。根据分子对接结果,JP与MAPK1、TP53和MYC结合良好。结论:本研究探讨了JP对抗SLE-GOP的潜在靶点和信号通路。这表明JP最有可能通过促进成骨细胞的增殖和分化来达到治疗SLE-GOP的目的。为今后临床和实验课题的研究提供了坚实的理论基础。
期刊介绍:
Journal of Immunology Research is a peer-reviewed, Open Access journal that provides a platform for scientists and clinicians working in different areas of immunology and therapy. The journal publishes research articles, review articles, as well as clinical studies related to classical immunology, molecular immunology, clinical immunology, cancer immunology, transplantation immunology, immune pathology, immunodeficiency, autoimmune diseases, immune disorders, and immunotherapy.