Lipid bilayer strengthens the cooperative network of membrane proteins.

Shaima Muhammednazaar, Jiaqi Yao, Matthew R Necelis, Yein C Park, Zhongtian Shen, Michael D Bridges, Ruiqiong Guo, Nicole Swope, May S Rhee, Miyeon Kim, Kelly H Kim, Wayne L Hubbell, Karen G Fleming, Linda Columbus, Seung-Gu Kang, Heedeok Hong
{"title":"Lipid bilayer strengthens the cooperative network of membrane proteins.","authors":"Shaima Muhammednazaar, Jiaqi Yao, Matthew R Necelis, Yein C Park, Zhongtian Shen, Michael D Bridges, Ruiqiong Guo, Nicole Swope, May S Rhee, Miyeon Kim, Kelly H Kim, Wayne L Hubbell, Karen G Fleming, Linda Columbus, Seung-Gu Kang, Heedeok Hong","doi":"10.1101/2023.05.30.542905","DOIUrl":null,"url":null,"abstract":"<p><p>Although membrane proteins fold and function in a lipid bilayer constituting cell membranes, their structure and functionality can be recapitulated in diverse amphiphilic assemblies whose compositions deviate from native membranes. It remains unclear how various hydrophobic environments can stabilize membrane proteins and whether lipids play any role therein. Here, using the evolutionary unrelated α-helical and β-barrel membrane proteins of <i>Escherichia coli</i> , we find that the hydrophobic thickness and the strength of amphiphile- amphiphile packing are critical environmental determinants of membrane protein stability. Lipid solvation enhances stability by facilitating residue burial in the protein interior and strengthens the cooperative network by promoting the propagation of local structural perturbations. This study demonstrates that lipids not only modulate membrane proteins' stability but also their response to external stimuli.</p>","PeriodicalId":72407,"journal":{"name":"bioRxiv : the preprint server for biology","volume":" ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-12-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10312574/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"bioRxiv : the preprint server for biology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1101/2023.05.30.542905","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

Although membrane proteins fold and function in a lipid bilayer constituting cell membranes, their structure and functionality can be recapitulated in diverse amphiphilic assemblies whose compositions deviate from native membranes. It remains unclear how various hydrophobic environments can stabilize membrane proteins and whether lipids play any role therein. Here, using the evolutionary unrelated α-helical and β-barrel membrane proteins of Escherichia coli , we find that the hydrophobic thickness and the strength of amphiphile- amphiphile packing are critical environmental determinants of membrane protein stability. Lipid solvation enhances stability by facilitating residue burial in the protein interior and strengthens the cooperative network by promoting the propagation of local structural perturbations. This study demonstrates that lipids not only modulate membrane proteins' stability but also their response to external stimuli.

Abstract Image

Abstract Image

Abstract Image

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
脂质双层强化膜整合酶的协同网络。
脂质双层为细胞中的膜蛋白提供了二维疏水溶剂环境。尽管天然双层被广泛认为是膜蛋白折叠和功能的最佳环境,但其潜在的物理基础仍然难以捉摸。在这里,使用大肠杆菌的膜内蛋白酶GlpG作为模型,我们阐明了与非天然疏水介质胶束相比,双层如何稳定膜蛋白并参与蛋白的残基相互作用网络。我们发现,与胶束相比,双层通过促进残基在蛋白质内部的埋藏来增强GlpG的稳定性。引人注目的是,当协同残基相互作用聚集在胶束中的多个不同区域时,蛋白质的整个堆积区域在双层中充当单个协同单元。分子动力学(MD)模拟表明,脂质对GlpG的溶剂化效率低于洗涤剂。因此,双层诱导的稳定性和协同性的增强可能源于蛋白质内的主要相互作用,而不是弱的脂质溶剂化。我们的发现揭示了膜蛋白折叠、功能和质量控制的基本机制。增强的协同性有利于促进局部结构扰动在膜上传播的函数。然而,同样的现象会使蛋白质的构象完整性容易受到引起构象疾病的错义突变的影响1,2。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Self-supervised segmentation and characterization of fiber bundles in anatomic tracing data. Single neuron contributions to the auditory brainstem EEG. Neural substrates of cold nociception in Drosophila larva. Inversions Can Accumulate Balanced Sexual Antagonism: Evidence from Simulations and Drosophila Experiments. Programming megakaryocytes to produce engineered platelets for delivering non-native proteins.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1