StoneNet: An Efficient Lightweight Model Based on Depthwise Separable Convolutions for Kidney Stone Detection from CT Images.

IF 3.9 2区 生物学 Q1 MATHEMATICAL & COMPUTATIONAL BIOLOGY Interdisciplinary Sciences: Computational Life Sciences Pub Date : 2023-12-01 Epub Date: 2023-07-15 DOI:10.1007/s12539-023-00578-8
Sohaib Asif, Ming Zhao, Xuehan Chen, Yusen Zhu
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Abstract

Kidney stone disease is one of the most common and serious health problems in much of the world, leading to many hospitalizations with severe pain. Detecting small stones is difficult and time-consuming, so an early diagnosis of kidney disease is needed to prevent the loss of kidney failure. Recent advances in artificial intelligence (AI) found to be very successful in the diagnosis of various diseases in the biomedical field. However, existing models using deep networks have several problems, such as high computational cost, long training time, and huge parameters. Providing a low-cost solution for diagnosing kidney stones in a medical decision support system is of paramount importance. Therefore, in this study, we propose "StoneNet", a lightweight and high-performance model for the detection of kidney stones based on MobileNet using depthwise separable convolution. The proposed model includes a combination of global average pooling (GAP), batch normalization, dropout layer, and dense layers. Our study shows that using GAP instead of flattening layers greatly improves the robustness of the model by significantly reducing the parameters. The developed model is benchmarked against four pre-trained models as well as the state-of-the-art heavy model. The results show that the proposed model can achieve the highest accuracy of 97.98%, and only requires training and testing time of 996.88 s and 14.62 s. Several parameters, such as different batch sizes and optimizers, were considered to validate the proposed model. The proposed model is computationally faster and provides optimal performance than other considered models. Experiments on a large kidney dataset of 1799 CT images show that StoneNet has superior performance in terms of higher accuracy and lower complexity. The proposed model can assist the radiologist in faster diagnosis of kidney stones and has great potential for deployment in real-time applications.

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StoneNet:一种基于深度可分离卷积的高效轻量级模型,用于从CT图像中检测肾结石。
肾结石疾病是世界上大多数地区最常见和最严重的健康问题之一,导致许多人因剧烈疼痛住院。检测小结石既困难又耗时,因此需要对肾脏疾病进行早期诊断,以防止肾衰竭的损失。人工智能(AI)的最新进展在生物医学领域的各种疾病诊断中非常成功。然而,现有的使用深度网络的模型存在计算成本高、训练时间长、参数大等问题。在医疗决策支持系统中提供诊断肾结石的低成本解决方案至关重要。因此,在本研究中,我们提出了“StoneNet”,这是一种基于MobileNet的轻量级高性能肾结石检测模型,使用深度可分离卷积。所提出的模型包括全局平均池(GAP)、批处理规范化、丢弃层和密集层的组合。我们的研究表明,使用GAP而不是压平层,通过显著减少参数,大大提高了模型的鲁棒性。开发的模型以四个预先训练的模型以及最先进的重型模型为基准。结果表明,该模型的最高精度为97.98%,只需要996.88 s和14.62 s的训练和测试时间。考虑了不同的批量和优化器等参数来验证该模型。与其他考虑的模型相比,所提出的模型在计算上更快并且提供最佳性能。在1799张CT图像的大型肾脏数据集上的实验表明,StoneNet在更高的准确性和更低的复杂性方面具有优越的性能。所提出的模型可以帮助放射科医生更快地诊断肾结石,并具有在实时应用中部署的巨大潜力。
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来源期刊
Interdisciplinary Sciences: Computational Life Sciences
Interdisciplinary Sciences: Computational Life Sciences MATHEMATICAL & COMPUTATIONAL BIOLOGY-
CiteScore
8.60
自引率
4.20%
发文量
55
期刊介绍: Interdisciplinary Sciences--Computational Life Sciences aims to cover the most recent and outstanding developments in interdisciplinary areas of sciences, especially focusing on computational life sciences, an area that is enjoying rapid development at the forefront of scientific research and technology. The journal publishes original papers of significant general interest covering recent research and developments. Articles will be published rapidly by taking full advantage of internet technology for online submission and peer-reviewing of manuscripts, and then by publishing OnlineFirstTM through SpringerLink even before the issue is built or sent to the printer. The editorial board consists of many leading scientists with international reputation, among others, Luc Montagnier (UNESCO, France), Dennis Salahub (University of Calgary, Canada), Weitao Yang (Duke University, USA). Prof. Dongqing Wei at the Shanghai Jiatong University is appointed as the editor-in-chief; he made important contributions in bioinformatics and computational physics and is best known for his ground-breaking works on the theory of ferroelectric liquids. With the help from a team of associate editors and the editorial board, an international journal with sound reputation shall be created.
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