Are anaerobic fungi crucial hidden players of microbiomes in anoxic environment?

IF 6 2区 生物学 Q1 MICROBIOLOGY Critical Reviews in Microbiology Pub Date : 2024-09-01 Epub Date: 2023-07-15 DOI:10.1080/1040841X.2023.2224425
Enamul Hoque, Johannes Fritscher
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Abstract

Anaerobic fungi are known to migrate and establish a 3D network of biofilms (microbiomes) and live invisible in the rumen and terrestrial subsurface, deep-sea - marine, and anoxic environment. They deserve our attention to understand anoxic fungal ecology and functions and develop new products and solutions. Such fungi activate unique genes to produce various polysaccharidases deemed essential for degrading plants' lignocellulosic materials. Nutrient release, recycling, and physical support by anaerobic fungi are crucial for microbiome formation. Multiple reports point to the ability of strictly anaerobic and facultative fungi to adapt and live in anoxic subsurface. Deep-sea sediments and natural anoxic methane-emitting salty waters of sulfidic springs offer suitable habitats for developing prokaryotic-fungal microbiomes. Researchers found a billion-year-old fossil of the fungus-prokaryotic sulfate-reducing consortium buried in deep-sea biospheres. Fungal spores' ability to migrate, even after germination, through sandy layers demonstrates their potential to move up and down porous geological layers or rock fissures. Selective fungal affinity to specific wood in wood chip arrays might help differentiate viable anaerobic fungi from an anoxic environment for their rapid collection and investigation. New collection methods, cultivation, gene expression, and drug and enzyme activity analyses can boost anaerobic fungal research.

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厌氧真菌是缺氧环境中微生物群落的重要隐性参与者吗?
众所周知,厌氧真菌可以迁移并建立三维生物膜网络(微生物群),在瘤胃、陆地地下、深海-海洋和缺氧环境中隐形生存。它们值得我们关注,以了解缺氧真菌生态学和功能,并开发新产品和解决方案。这类真菌会激活独特的基因,产生各种被认为降解植物木质纤维素材料所必需的多糖酶。厌氧真菌的营养释放、循环利用和物理支持对微生物群的形成至关重要。多份报告指出,严格厌氧真菌和兼性真菌有能力适应缺氧的地下环境并在其中生存。深海沉积物和硫化泉的天然缺氧甲烷排放咸水为原核-真菌微生物组的形成提供了合适的栖息地。研究人员发现了埋藏在深海生物圈中的具有十亿年历史的真菌-原核生物硫酸盐还原联合体化石。真菌孢子即使在发芽后也能在沙层中迁移,这表明它们具有在多孔地质层或岩石裂缝中上下移动的潜力。木屑阵列中真菌对特定木材的选择性亲和性可能有助于从缺氧环境中分辨出有生命力的厌氧真菌,以便对其进行快速收集和研究。新的采集方法、培养、基因表达以及药物和酶活性分析可以促进厌氧真菌研究。
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来源期刊
Critical Reviews in Microbiology
Critical Reviews in Microbiology 生物-微生物学
CiteScore
14.70
自引率
0.00%
发文量
99
期刊介绍: Critical Reviews in Microbiology is an international, peer-reviewed journal that publishes comprehensive reviews covering all areas of microbiology relevant to humans and animals, including medical and veterinary microbiology, public health and environmental microbiology. These may include subjects related to microbial molecular biology, immunopathogenicity, physiology, biochemistry, structure, and epidemiology. Of particular interest are reviews covering clinical aspects of bacterial, virological, fungal and parasitic diseases. All reviews must be analytical, comprehensive, and balanced in nature. Editors welcome uninvited submissions, as well as suggested topics for reviews accompanied by an abstract.
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