Transcriptome analysis reveals a common adaptive transcriptional response of Candida glabrata to diverse environmental stresses

IF 2.5 4区 生物学 Q3 MICROBIOLOGY Research in microbiology Pub Date : 2023-06-01 DOI:10.1016/j.resmic.2023.104073
Maruti Nandan Rai , Rikky Rai , Pooja Sethiya , Chirag Parsania
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Abstract

Candida glabrata, an opportunistic fungal pathogen, causes superficial and life-threatening infections in humans. In the host microenvironment, C. glabrata encounters a variety of stresses, and its ability to cope with these stresses is crucial for its pathogenesis. To gain insights into how C. glabrata adapts to adverse environmental conditions, we examined its transcriptional landscape under heat, osmotic, cell wall, oxidative, and genotoxic stresses using RNA sequencing and reveal that C. glabrata displays a diverse transcriptional response involving ∼75% of its genome for adaptation to different environmental stresses. C. glabrata mounts a central common adaptation response wherein ∼25% of all genes (n = 1370) are regulated in a similar fashion at different environmental stresses. Elevated cellular translation and diminished mitochondrial activity-associated transcriptional signature characterize the common adaptation response. Transcriptional regulatory association networks of common adaptation response genes revealed a set of 29 transcription factors acting as potential activators and repressors of associated adaptive response genes. Overall, the current work delineates the adaptive responses of C. glabrata to diverse environmental stresses and reports the existence of a common adaptive transcriptional response upon prolonged exposure to environmental stresses.

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转录组分析揭示了光假丝酵母对不同环境胁迫的共同适应性转录反应
光滑念珠菌是一种机会性真菌病原体,可引起人类浅表和危及生命的感染。在宿主微环境中,光滑念珠菌会遇到各种应激,其应对这些应激的能力对其发病机制至关重要。为了深入了解光滑乳杆菌如何适应不利的环境条件,我们使用RNA测序检查了其在热、渗透、细胞壁、氧化和基因毒性胁迫下的转录景观,并发现光滑乳杆菌表现出多种转录反应,涉及其基因组的约75%,以适应不同的环境胁迫。光滑乳杆菌产生一种中心的共同适应反应,其中~25%的所有基因(n=1370)在不同的环境胁迫下以相似的方式受到调节。细胞翻译升高和线粒体活性降低相关的转录信号表征了常见的适应反应。常见适应反应基因的转录调控关联网络揭示了一组29种转录因子作为相关适应反应基因潜在的激活因子和阻遏因子。总的来说,目前的工作描述了玻璃藻对不同环境胁迫的适应性反应,并报道了在长期暴露于环境胁迫时存在常见的适应性转录反应。
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来源期刊
Research in microbiology
Research in microbiology 生物-微生物学
CiteScore
4.10
自引率
3.80%
发文量
54
审稿时长
16 days
期刊介绍: Research in Microbiology is the direct descendant of the original Pasteur periodical entitled Annales de l''Institut Pasteur, created in 1887 by Emile Duclaux under the patronage of Louis Pasteur. The Editorial Committee included Chamberland, Grancher, Nocard, Roux and Straus, and the first issue began with Louis Pasteur''s "Lettre sur la Rage" which clearly defines the spirit of the journal:"You have informed me, my dear Duclaux, that you intend to start a monthly collection of articles entitled "Annales de l''Institut Pasteur". You will be rendering a service that will be appreciated by the ever increasing number of young scientists who are attracted to microbiological studies. In your Annales, our laboratory research will of course occupy a central position, but the work from outside groups that you intend to publish will be a source of competitive stimulation for all of us."That first volume included 53 articles as well as critical reviews and book reviews. From that time on, the Annales appeared regularly every month, without interruption, even during the two world wars. Although the journal has undergone many changes over the past 100 years (in the title, the format, the language) reflecting the evolution in scientific publishing, it has consistently maintained the Pasteur tradition by publishing original reports on all aspects of microbiology.
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