囊性纤维化跨膜电导调节器的晶体管模型。

IF 2.4 Q3 BIOPHYSICS Biophysical reports Pub Date : 2023-06-14 DOI:10.1016/j.bpr.2023.100108
William D Hunt, Nael A McCarty, Eduardo Martinez Marin, Ryan S Westafer, Phillip R Yamin, Guiying Cui, Andrew W Eckford, Douglas R Denison
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引用次数: 1

摘要

在本文中,我们提出了一个囊性纤维化跨膜电导调节器(CFTR)的晶体管电路模型,旨在绘制CFTR在野生型和突变型中的功能形式。电路结构的配置,使功能,并尽可能多的形式,忠实地代表什么是已知的CFTR从低温电子显微镜和分子动力学。该模型是一个混合模拟-数字拓扑结构,具有与门接收来自两个单独的atp核苷酸结合域结合事件的输入。电路的模拟部分将与门的输出作为其输入。从单通道膜片钳实验中提取电路模型输入及其噪声特性。然后将模型预测的氯化物电流与野生型CFTR的单通道膜片钳记录进行比较。我们还考虑了CFTR带有G551D点突变的膜片钳记录,这是一种对治疗管理有反应的临床相关突变。我们的电路模型方法使生物工程方法能够实现CFTR,并允许生物物理学家使用有效的电路仿真工具来分析其行为。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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A transistor model for the cystic fibrosis transmembrane conductance regulator.

In this paper we present a transistor circuit model for cystic fibrosis transmembrane conductance regulator (CFTR) that seeks to map the functional form of CFTR both in wild type and mutants. The circuit architecture is configured so that the function, and as much as possible the form, faithfully represents what is known about CFTR from cryo-electron microscopy and molecular dynamics. The model is a mixed analog-digital topology with an AND gate receiving the input from two separate ATP-nucleotide-binding domain binding events. The analog portion of the circuit takes the output from the AND gate as its input. The input to the circuit model and its noise characteristics are extracted from single-channel patch-clamp experiments. The chloride current predicted by the model is then compared with single-channel patch-clamp recordings for wild-type CFTR. We also consider the patch-clamp recordings from CFTR with a G551D point mutation, a clinically relevant mutant that is responsive to therapeutic management. Our circuit model approach enables bioengineering approaches to CFTR and allows biophysicists to use efficient circuit simulation tools to analyze its behavior.

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来源期刊
Biophysical reports
Biophysical reports Biophysics
CiteScore
2.40
自引率
0.00%
发文量
0
审稿时长
75 days
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