通过使用日平均温度作为传播率季节性变化的代表,可在流行人群模型中实现温带气候下covid-19传播率的季节性变化

IF 3 4区 环境科学与生态学 Q2 ENVIRONMENTAL SCIENCES Microbial Risk Analysis Pub Date : 2022-12-01 DOI:10.1016/j.mran.2022.100235
Morten Guldborg Johnsen , Lasse Engbo Christiansen , Kaare Græsbøll
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引用次数: 0

摘要

从2020年3月至2022年3月,2019冠状病毒病表现出冬季感染增加、夏季感染人数减少的一贯模式。了解季节变化对covid-19传播的影响对于未来的流行病建模和管理至关重要。在本研究中,基于丹麦的covid-19流行人群模型(包括2020年3月至2021年3月期间国家限制的变化和α-变异covid-19毒株的引入),估计了covid-19传播率的季节性变化。将季节变化作为传播速率的logistic温度依赖标度,并通过基于拒绝的近似贝叶斯计算(ABC)估计logistic关系的参数。ABC中使用的可能性基于国家住院数据和血清患病率数据,分别分为9个和2个年龄组。在丹麦,季节性导致的covid-19传播率下降估计为27% (95% CI [24%;31%]),当从冬季高峰转移到夏季高峰时。季节性对每+1°C日平均气温下传播率的降低作用因气温的不同而不同,估计为- 2.2%[- 2.8%;- 1.7%]pr。2%[−2.3%;−1.7%]pr. 1°C左右;和1.7%[- 2.0%;- 1.5%]p . 1°C左右的日平均气温为11°C。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Seasonal variation in the transmission rate of covid-19 in a temperate climate can be implemented in epidemic population models by using daily average temperature as a proxy for seasonal changes in transmission rate

From march 2020 to march 2022 covid-19 has shown a consistent pattern of increasing infections during the Winter and low infection numbers during the Summer. Understanding the effects of seasonal variation on covid-19 spread is crucial for future epidemic modelling and management. In this study, seasonal variation in the transmission rate of covid-19, was estimated based on an epidemic population model of covid-19 in Denmark, which included changes in national restrictions and introduction of the α-variant covid-19 strain, in the period March 2020 - March 2021. Seasonal variation was implemented as a logistic temperature dependent scaling of the transmission rate, and parameters for the logistic relationship was estimated through rejection-based approximate bayesian computation (ABC). The likelihoods used in the ABC were based on national hospital admission data and seroprevalence data stratified into nine and two age groups, respectively. The seasonally induced reduction in the transmission rate of covid-19 in Denmark was estimated to be 27%, (95% CI [24%; 31%]), when moving from peak Winter to peak Summer. The reducing effect of seasonality on transmission rate per +1C in daily average temperature were shown to vary based on temperature, and were estimated to be 2.2%[2.8%;1.7%] pr. 1 C around 2C; 2%[2.3%;1.7%] pr. 1 C around 7C; and 1.7%[2.0%;1.5%] pr. 1 C around a daily average temperature of 11 C.

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来源期刊
Microbial Risk Analysis
Microbial Risk Analysis Medicine-Microbiology (medical)
CiteScore
5.70
自引率
7.10%
发文量
28
审稿时长
52 days
期刊介绍: The journal Microbial Risk Analysis accepts articles dealing with the study of risk analysis applied to microbial hazards. Manuscripts should at least cover any of the components of risk assessment (risk characterization, exposure assessment, etc.), risk management and/or risk communication in any microbiology field (clinical, environmental, food, veterinary, etc.). This journal also accepts article dealing with predictive microbiology, quantitative microbial ecology, mathematical modeling, risk studies applied to microbial ecology, quantitative microbiology for epidemiological studies, statistical methods applied to microbiology, and laws and regulatory policies aimed at lessening the risk of microbial hazards. Work focusing on risk studies of viruses, parasites, microbial toxins, antimicrobial resistant organisms, genetically modified organisms (GMOs), and recombinant DNA products are also acceptable.
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