红色大型藻类(Bangiaceae)及其食品(紫菜片)中 RNA 病毒的检测和特征描述。

IF 2.1 4区 环境科学与生态学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Microbes and Environments Pub Date : 2022-01-01 DOI:10.1264/jsme2.ME21084
Yukino Mizutani, Yuto Chiba, Syun-Ichi Urayama, Yuji Tomaru, Daisuke Hagiwara, Kei Kimura
{"title":"红色大型藻类(Bangiaceae)及其食品(紫菜片)中 RNA 病毒的检测和特征描述。","authors":"Yukino Mizutani, Yuto Chiba, Syun-Ichi Urayama, Yuji Tomaru, Daisuke Hagiwara, Kei Kimura","doi":"10.1264/jsme2.ME21084","DOIUrl":null,"url":null,"abstract":"<p><p>Persistent RNA viruses, which have been suggested to form symbiotic relationships with their hosts, have been reported to occur in eukaryotes, such as plants, fungi, and algae. Based on empirical findings, these viruses may also be present in commercially cultivated macroalgae. Accordingly, the present study aimed to screen red macroalgae (family Bangiaceae conchocelis and Neopyropia yezoensis thallus) and processed nori sheets (N. yezoensis) for persistent RNA viruses using fragmented and primer-ligated dsRNA sequencing (FLDS) and targeted reverse transcription PCR (RT-PCR). A Totiviridae-related virus was detected in the conchocelis of Neoporphyra haitanensis, which is widely cultivated in China, while two Mitoviridae-related viruses were found in several conchocelis samples and all N. yezoensis-derived samples (thallus and nori sheets). Mitoviridae-related viruses in N. yezoensis are widespread among cultivated species and not expected to inhibit host growth. Mitoviridae-related viruses were also detected in several phylogenetically distant species in the family Bangiaceae, which suggests that these viruses persisted and coexist in the family Bangiaceae over a long period of time. The present study is the first to report persistent RNA viruses in nori sheets and their raw materials.</p>","PeriodicalId":18482,"journal":{"name":"Microbes and Environments","volume":"37 5","pages":""},"PeriodicalIF":2.1000,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9763034/pdf/","citationCount":"0","resultStr":"{\"title\":\"Detection and Characterization of RNA Viruses in Red Macroalgae (Bangiaceae) and Their Food Product (Nori Sheets).\",\"authors\":\"Yukino Mizutani, Yuto Chiba, Syun-Ichi Urayama, Yuji Tomaru, Daisuke Hagiwara, Kei Kimura\",\"doi\":\"10.1264/jsme2.ME21084\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Persistent RNA viruses, which have been suggested to form symbiotic relationships with their hosts, have been reported to occur in eukaryotes, such as plants, fungi, and algae. Based on empirical findings, these viruses may also be present in commercially cultivated macroalgae. Accordingly, the present study aimed to screen red macroalgae (family Bangiaceae conchocelis and Neopyropia yezoensis thallus) and processed nori sheets (N. yezoensis) for persistent RNA viruses using fragmented and primer-ligated dsRNA sequencing (FLDS) and targeted reverse transcription PCR (RT-PCR). A Totiviridae-related virus was detected in the conchocelis of Neoporphyra haitanensis, which is widely cultivated in China, while two Mitoviridae-related viruses were found in several conchocelis samples and all N. yezoensis-derived samples (thallus and nori sheets). Mitoviridae-related viruses in N. yezoensis are widespread among cultivated species and not expected to inhibit host growth. Mitoviridae-related viruses were also detected in several phylogenetically distant species in the family Bangiaceae, which suggests that these viruses persisted and coexist in the family Bangiaceae over a long period of time. The present study is the first to report persistent RNA viruses in nori sheets and their raw materials.</p>\",\"PeriodicalId\":18482,\"journal\":{\"name\":\"Microbes and Environments\",\"volume\":\"37 5\",\"pages\":\"\"},\"PeriodicalIF\":2.1000,\"publicationDate\":\"2022-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9763034/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Microbes and Environments\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://doi.org/10.1264/jsme2.ME21084\",\"RegionNum\":4,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Microbes and Environments","FirstCategoryId":"93","ListUrlMain":"https://doi.org/10.1264/jsme2.ME21084","RegionNum":4,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

据报道,真核生物(如植物、真菌和藻类)中存在持久性 RNA 病毒,这些病毒被认为与其宿主形成共生关系。根据经验发现,这些病毒也可能存在于商业养殖的大型藻类中。因此,本研究旨在利用片段和引物连接dsRNA测序(FLDS)和靶向反转录PCR(RT-PCR)技术,筛选红色大型藻类(Bangiaceae conchocelis和Neopyropia yezoensis thallus)和加工紫菜片(N. yezoensis)中的持久性RNA病毒。在中国广泛栽培的海坛紫菜(Neoporphyra haitanensis)的海螺中检测到了一种与Totiviridae相关的病毒,而在几种海螺样本和所有酵母紫菜(Neoporphyra yezoensis)衍生样本(叶柄和紫菜片)中发现了两种与Mitoviridae相关的病毒。酵母藻中与丝状病毒相关的病毒在栽培物种中很普遍,预计不会抑制宿主的生长。在班氏科中几个系统发育较远的物种中也检测到了与米托病毒相关的病毒,这表明这些病毒在班氏科中长期存在并共存。本研究首次报告了紫菜片及其原材料中的持久性 RNA 病毒。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

摘要图片

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Detection and Characterization of RNA Viruses in Red Macroalgae (Bangiaceae) and Their Food Product (Nori Sheets).

Persistent RNA viruses, which have been suggested to form symbiotic relationships with their hosts, have been reported to occur in eukaryotes, such as plants, fungi, and algae. Based on empirical findings, these viruses may also be present in commercially cultivated macroalgae. Accordingly, the present study aimed to screen red macroalgae (family Bangiaceae conchocelis and Neopyropia yezoensis thallus) and processed nori sheets (N. yezoensis) for persistent RNA viruses using fragmented and primer-ligated dsRNA sequencing (FLDS) and targeted reverse transcription PCR (RT-PCR). A Totiviridae-related virus was detected in the conchocelis of Neoporphyra haitanensis, which is widely cultivated in China, while two Mitoviridae-related viruses were found in several conchocelis samples and all N. yezoensis-derived samples (thallus and nori sheets). Mitoviridae-related viruses in N. yezoensis are widespread among cultivated species and not expected to inhibit host growth. Mitoviridae-related viruses were also detected in several phylogenetically distant species in the family Bangiaceae, which suggests that these viruses persisted and coexist in the family Bangiaceae over a long period of time. The present study is the first to report persistent RNA viruses in nori sheets and their raw materials.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Microbes and Environments
Microbes and Environments 生物-生物工程与应用微生物
CiteScore
4.10
自引率
13.60%
发文量
66
审稿时长
3 months
期刊介绍: Microbial ecology in natural and engineered environments; Microbial degradation of xenobiotic compounds; Microbial processes in biogeochemical cycles; Microbial interactions and signaling with animals and plants; Interactions among microorganisms; Microorganisms related to public health; Phylogenetic and functional diversity of microbial communities; Genomics, metagenomics, and bioinformatics for microbiology; Application of microorganisms to agriculture, fishery, and industry; Molecular biology and biochemistry related to environmental microbiology; Methodology in general and environmental microbiology; Interdisciplinary research areas for microbial ecology (e.g., Astrobiology, and Origins of Life); Taxonomic description of novel microorganisms with ecological perspective; Physiology and metabolisms of microorganisms; Evolution of genes and microorganisms; Genome report of microorganisms with ecological perspective.
期刊最新文献
Cell cycle perturbation uncouples mitotic progression and invasive behavior in a post-mitotic cell. Gustatory Responsiveness of Honey Bees Colonized with a Defined or Conventional Gut Microbiota. DiGAlign: Versatile and Interactive Visualization of Sequence Alignment for Comparative Genomics. Global Distribution and Diversity of Marine Parmales. Quest for Nitrous Oxide-reducing Bacteria Present in an Anammox Biofilm Fed with Nitrous Oxide.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1