单细胞测序引领了转录组学分析的新时代

Huidan Zhang, Naiwen Cui, Yamei Cai, F. Lei, D. Weitz
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引用次数: 6

摘要

理解生物系统的复杂性需要对其细胞群进行全面的分析。理想情况下,这应该在单个细胞水平上完成,因为由于平均引入的伪影,对整个种群的大量分析模糊了许多关键细节。然而,由于在单细胞基础上执行分析的繁琐程序、低吞吐量和高成本,这在技术上具有挑战性。令人兴奋的是,单细胞RNA测序技术的进步使得在单细胞水平上分析大量细胞的转录组学在经济上可行,并且已经产生了许多解决重要生物学和医学问题的结果。该技术和数据分析的进一步发展将通过揭示单个细胞在其微环境中的功能和建模其转录动力学来显着造福生物医学领域。关键词:细胞转录组学;CEL-Seq;Hi-SCL;MARS-Seq;SCRB-Seq;单细胞RNA测序;Smart-Seq2;sNuc-seq
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Single-cell sequencing leads a new era of profiling transcriptomic landscape
Understanding the complexity of biological systems requires a comprehensive analysis of their cell populations. Ideally, this should be done at the single cell level, because bulk analysis of the full population obscured many critical details due to artifacts introduced by averaging. However, this has been technically challenging due to the cumbersome procedure, low throughput, and high costs of performing analysis on a single-cell basis. Excitingly, technical improvements in single-cell RNA sequencing are making it economically practical to profile the transcriptomics of large populations of cells at the single-cell level, and have yielded numerous results that address important biological and medical questions. Further development of the technology and data analysis will significantly benefit the biomedical field by unraveling the function of individual cells in their microenvironments and modeling their transcriptional dynamics. Key words: cell transcriptomics; CEL-Seq; Hi-SCL; MARS-Seq; SCRB-Seq; single-cell RNA sequencing; Smart-Seq2; sNuc-seq
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